Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0686
(662 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 31 0.68
At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containi... 29 2.8
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 29 2.8
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 29 2.8
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 29 2.8
At2g38630.1 68415.m04745 expressed protein 29 3.6
At1g33430.1 68414.m04138 galactosyltransferase family protein co... 29 3.6
At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /... 28 6.4
At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /... 28 6.4
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 28 6.4
At3g42060.1 68416.m04315 myosin heavy chain-related 28 6.4
At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid t... 27 8.4
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
Pfam PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 31.1 bits (67), Expect = 0.68
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 513 SLDEWCYSRGPELGILACCRQPDLRPQLRHPDYA 614
S+ WC+ R P L IL C + + + HP Y+
Sbjct: 255 SVASWCHPRAPNLDILTCVKDSHIW-SIEHPTYS 287
>At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containing
protein / ELM2 domain-containing protein / Myb-like
DNA-binding domain-containing protein similar to
BRG1-binding protein ELD/OSA1 [Homo sapiens]
GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT
DNA binding domain, PF01448: ELM2 domain, PF00249:
Myb-like DNA-binding domain
Length = 573
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 197 LRWLYRPQGVGDHCSSLCCRRITVV 271
LR+ RP + HCSS CC ++V
Sbjct: 307 LRYSIRPPNLSKHCSSSCCNGSSLV 331
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -1
Query: 179 WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 63
WI A+G + L GS NT I ++F +FNEV
Sbjct: 903 WILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEV 941
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 405 WSLSKEMSLGCTKLGRVSSYVG*LYHSVDSEMYSGVVKFVTPAR 274
W + +++ +GC K+G++ V L S S + ++K VT +R
Sbjct: 654 WRICRKLRIGCMKMGKMRPKVFMLQSSRSSRRWVTLLKCVTRSR 697
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 405 WSLSKEMSLGCTKLGRVSSYVG*LYHSVDSEMYSGVVKFVTPAR 274
W + +++ +GC K+G++ V L S S + ++K VT +R
Sbjct: 654 WRICRKLRIGCMKMGKMRPKVFMLQSSRSSRRWVTLLKCVTRSR 697
>At2g38630.1 68415.m04745 expressed protein
Length = 467
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 230 DHCSSLCCR--RITVVIRAGVTNLTTPEYISESTEWYNYPTYDD 355
D+ SSL CR RI ++R G + P + SES +W + +DD
Sbjct: 153 DNYSSLKCRSTRIEYILR-GQADAGFPLFESESLKWPGFVEFDD 195
>At1g33430.1 68414.m04138 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 395
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 456 DDCTRIGWRYLVKTTGRWSLSKEMSLGCTKLGRVSSYVG*LYH 328
DD + LV T R+ + +GC K G V S G YH
Sbjct: 229 DDDVHVNLGMLVTTLARYQSRPRIYIGCMKSGPVLSQKGVKYH 271
>At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 447
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +3
Query: 72 EDINKDVDTTNLRIVSGWEATPGQHPHHAAL 164
E+ ++L +S W+ P QHPHH L
Sbjct: 325 EEFRNTTVNSDLHFIS-WDNPPKQHPHHLTL 354
>At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 434
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Frame = +3
Query: 99 TNLRIVSGWEATPGQHPHHAAL----RMVD 176
++L +S W+ P QHPHH L RMVD
Sbjct: 321 SDLHFIS-WDNPPKQHPHHLTLDDFQRMVD 349
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 179 WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 63
WI A+G + L G NT I ++F +FNE+
Sbjct: 902 WILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEI 940
>At3g42060.1 68416.m04315 myosin heavy chain-related
Length = 712
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 63 YFIEDINKDVDTTNLRIVSGWEATPGQHPHHAA 161
+F + + VD TNL V+ W PG P H A
Sbjct: 301 FFAKLSDVSVDDTNLSCVNIWNFNPGFVPRHEA 333
>At3g22620.1 68416.m02856 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 203
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -3
Query: 552 PVQDLGSSTIRPETT*PLAYTVSPS 478
P D G ST RP T AY +SPS
Sbjct: 165 PTSDDGGSTSRPSETPSSAYALSPS 189
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,327,807
Number of Sequences: 28952
Number of extensions: 369323
Number of successful extensions: 1086
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1393347168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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