Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0685
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   2.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   5.0  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
 Frame = +1

Query: 211 LQELHH---LIHSKFPY*YNHFN 270
           LQ LHH   L H+  PY  NH N
Sbjct: 36  LQGLHHSPHLNHAMHPYHANHVN 58


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 343 IIFNYFIRILFYYFTS 390
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 343 IIFNYFIRILFYYFTS 390
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 585 FCRCSMIISLHFY 623
           FCR  +I   HFY
Sbjct: 301 FCRAFIIFPTHFY 313


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +1

Query: 514 IRHLNNHFSKNHHF 555
           ++ L+NH  KN H+
Sbjct: 560 LKELSNHMVKNSHY 573


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,426
Number of Sequences: 336
Number of extensions: 2278
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)