Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0684
         (671 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...   111   1e-26
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   2.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   3.8  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   3.8  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   3.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.6  

>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score =  111 bits (268), Expect = 1e-26
 Identities = 63/168 (37%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
 Frame = +3

Query: 171 NPLFEKRPKNFAIGQGIQPTRDLSRFVRGPSISASSARRLYFSVV*KCPLRSTNLPRHWT 350
           NPLFEKR KN+ IGQ +QP RDLSRFV+ P        R       K P       +   
Sbjct: 35  NPLFEKRVKNYGIGQNVQPKRDLSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLD 94

Query: 351 RLQLRAFSRFWRN-TXXXXXXXXXXXXXXXXXXXXXXEMSLHQRGPTPSDPAQTSHQAGR 527
           +   +   + W+                         E    +R         +  +   
Sbjct: 95  KPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPSKRANQLRQGINSVVKMVE 154

Query: 528 EEEGALVVIAHDVDPIELVLFLPAVCRKMGVPYCIVKGKSRLGALVHR 671
           +++  LV+IAHDVDPIELV++LPA+CRKMGVPYCI+KGK+RLG LV+R
Sbjct: 155 QKKAQLVIIAHDVDPIELVVYLPALCRKMGVPYCIIKGKARLGTLVYR 202



 Score = 99.5 bits (237), Expect = 8e-23
 Identities = 47/91 (51%), Positives = 58/91 (63%)
 Frame = +2

Query: 236 LVQICKRPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 415
           L +  K PKYIRIQR +A+LQ+RLK+PPPINQFTQTLDK TA+ + K  +KYRPE     
Sbjct: 57  LSRFVKWPKYIRIQRHRAILQKRLKIPPPINQFTQTLDKPTAQQVMKCWKKYRPENPIAR 116

Query: 416 XXXXXXXXXXNVAKRDEPPPKRPNTIRSGTN 508
                       A ++EPP KR N +R G N
Sbjct: 117 VQRLKAKAEAKAAGKEEPPSKRANQLRQGIN 147


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 174 PLFEKRPKNFAIGQGIQPTRDLSRFVRGPSISASSAR 284
           P F   P   + G G+Q   +LS   R P IS  + R
Sbjct: 402 PEFPPTPPQLSPGVGLQSQNNLSNTNRSPQISPFAKR 438


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 409  CFSLRPVFLQNLEKALSCSLVQCLGKLVDRRGH 311
            CF  + V ++ +    S + +  L + V RRGH
Sbjct: 1454 CFVTKAVHIELVSNLTSSAFLAALRRFVARRGH 1486


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +2

Query: 299 RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 400
           R+L++     + T+T+++  A+ +   L ++RPE
Sbjct: 229 RKLRLKVCSRELTETVERVAAEAINSKLHEHRPE 262


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 448 VSFSSFPQPLFPGCFSLRPVFLQNLEKAL 362
           + F  F QP+F  C+ L  + L+N+   +
Sbjct: 506 IKFGLFFQPIFSVCWFLEVIALENVHSCV 534


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -3

Query: 246 IWTSHELAECPDQ*QSSLASSRREDSRSSWAQPF*PPMGRR 124
           +WT+  +  CP Q Q  L   +++  +    + + PP  R+
Sbjct: 419 LWTT-VVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQLRQ 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 643,407
Number of Sequences: 2352
Number of extensions: 12296
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)