Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0683
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 89 9e-19
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 1e-04
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 38 0.001
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 38 0.002
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 37 0.003
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.019
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 34 0.019
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.026
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 34 0.026
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.14
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.24
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.24
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.24
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.24
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.55
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 29 0.55
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.97
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 28 1.3
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 28 1.7
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 2.2
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 25 9.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 88.6 bits (210), Expect = 9e-19
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +3
Query: 513 FVYPLDFARTRLAADV--GKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIY 686
FVY LD+ARTRLA D K G+R+F+GL + K ++SDGL GLYRGFG SV GI++Y
Sbjct: 149 FVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVY 208
Query: 687 RASYFGFYDTAR 722
R YFG YDT +
Sbjct: 209 RGLYFGMYDTLK 220
Score = 81.0 bits (191), Expect = 2e-16
Identities = 34/50 (68%), Positives = 42/50 (84%)
Frame = +1
Query: 274 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 423
RYKGI + F R E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F
Sbjct: 70 RYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF 119
Score = 50.0 bits (114), Expect = 4e-07
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2
Query: 149 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 244
F DF+ GG+SAAVSKTA APIERVKLL+Q Q
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQ 58
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 244 ARQQQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 423
A+ + ++++ G+VD + + + GL +RG +V+ + L F D K V
Sbjct: 164 AKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVV 223
Query: 424 LGG 432
L G
Sbjct: 224 LVG 226
Score = 29.5 bits (63), Expect = 0.55
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 585 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGM 728
+ G+G C + +G+I L+RG +V +A F F D + M
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKM 118
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.9 bits (94), Expect = 1e-04
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 256 QIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 417
Q+ ++ Y + V+I +GL+ F+RGN N +R FP A+ FA + KQ
Sbjct: 49 QVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +2
Query: 164 LAGGISAAVSKTAVAPIERVKLLLQVQH 247
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 34.7 bits (76), Expect = 0.015
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +3
Query: 519 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASY 698
+P D R R + G G + + + I I+K++G+ G +RG+ ++ II +
Sbjct: 245 FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSIT 303
Query: 699 FGFYDTARGMLPD 737
+ Y+T ML D
Sbjct: 304 WYTYETVSKMLHD 316
Score = 31.1 bits (67), Expect = 0.18
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 579 REFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 713
+E++ L + + KI+ +GLIG +RG G + Y A F ++
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
Score = 30.3 bits (65), Expect = 0.32
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 277 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 393
YK I A I K +G+ F+RG +N+++ P ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.9 bits (94), Expect = 1e-04
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +3
Query: 516 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 653
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 39.5 bits (88), Expect = 5e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +3
Query: 516 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 695
V P + + RL DV +++G +C +KI K + ++ LY GF ++ +++ A
Sbjct: 122 VVPFELMKIRLQ-DVKNAS---KYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAG 177
Query: 696 YFGFYDTARGML 731
YFG R L
Sbjct: 178 YFGVIQKIRNSL 189
Score = 33.5 bits (73), Expect = 0.034
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 247 RQQQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 423
R Q Y G D +I K +G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 247 RQQQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 414
R Q + +Y G VD F +I K++ +L+ + G A + R+ A F K +
Sbjct: 131 RLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIR 186
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +3
Query: 504 LSCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIII 683
LSC+ PL+ AR + + + KG Q G+ I I+K++G+ GLYRG V G+
Sbjct: 218 LSCWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYRG-AVPRMGLGA 274
Query: 684 YRASYFGFY-DTARGML 731
Y+ F D RG L
Sbjct: 275 YQTFVMVFLADCVRGYL 291
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +3
Query: 513 FVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYR 689
F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG V + G+ Y
Sbjct: 245 FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRGVLVGILGMFPYS 302
Query: 690 ASYFGFYD 713
A+ G ++
Sbjct: 303 ATDLGTFE 310
Score = 33.9 bits (74), Expect = 0.026
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 137 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 235
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 31.1 bits (67), Expect = 0.18
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +1
Query: 277 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 417
Y G +D F + K +G ++G N+++ P+ A+++ + K+
Sbjct: 375 YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 37.1 bits (82), Expect = 0.003
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +2
Query: 155 KDFLAGGISAAVSKTAVAPIERVKLLLQVQH 247
K +AGG + V+K+ VAP++RVK+L Q H
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNH 49
Score = 27.5 bits (58), Expect = 2.2
Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 12/81 (14%)
Frame = +3
Query: 513 FVYPLDFARTRLA--ADVGKGDG----------QREFSGLGNCISKIFKSDGLIGLYRGF 656
F YPL+ R RLA + GK +R+F + + + YRGF
Sbjct: 133 FTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFL-CNKKYPGLSRLSKICNFYRGF 191
Query: 657 GVSVQGIIIYRASYFGFYDTA 719
V++ GI Y F YD A
Sbjct: 192 SVTLTGIFPYAGMSFLAYDLA 212
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.3 bits (75), Expect = 0.019
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +3
Query: 522 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGI 677
P+ +TRL D G + S + +CI K + +G GLY+G S+ G+
Sbjct: 182 PIWLVKTRLQLDKKSGQAAQYRSSI-DCIIKTIRLEGFRGLYKGLSASLLGV 232
Score = 30.3 bits (65), Expect = 0.32
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 98 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 238
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 28.7 bits (61), Expect = 0.97
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 274 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 393
+Y G++ F + EQG++ + G A+++R P + F
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 34.3 bits (75), Expect = 0.019
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Frame = +3
Query: 522 PLDFARTR--LAADVGKGD-GQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 692
P + +TR L + K D +R + +G S I + +G+ GL RG G + I
Sbjct: 43 PFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNG 102
Query: 693 SYFGFYDTAR-----GMLPDPKNTPIVI 761
GFY+ R L DPK + I
Sbjct: 103 CRLGFYEPIRRTLNTWFLDDPKGNKLAI 130
Score = 29.1 bits (62), Expect = 0.73
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 600 NCISKIFKSDGLIGLYRGFGVSVQGI 677
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 161 FLAGGISAAVSKTAVAPIERVKLLLQVQ 244
FL+GG++A + T P E +K Q+Q
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQ 54
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.026
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 591 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 713
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 33.9 bits (74), Expect = 0.026
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +1
Query: 244 ARQQQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 420
+R Q ++A + YK + +I + GLL FW G + R + + F +K ++
Sbjct: 229 SRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 585 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 722
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.24
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 585 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 722
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.24
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 140 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 244
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 146 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 244
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 600 NCISKIFKSDGLIGLYRGFGVSVQGI 677
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 519 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 656
YP D ++++ D + + C I+ GL G YRGF
Sbjct: 231 YPFDIVKSKIQTDGFLS--KATYKNSWQCAKGIYTKAGLRGFYRGF 274
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 30.7 bits (66), Expect = 0.24
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 600 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI 761
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I +
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISV 174
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 286 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 378
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.24
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +3
Query: 516 VYPLDFARTRLAADVGKGDGQREFSG-LGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRA 692
+YP+D +TR+ G R SG + N + KI ++G+ L+RG + G A
Sbjct: 37 MYPVDAIKTRMQMLNGVS---RSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 693 SYFGFYDTARGMLPDPKNTPI 755
YF + + + + P+
Sbjct: 94 IYFSVLEFFKSKINASPDRPL 114
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = +2
Query: 164 LAGGISAAVSKTAVAPIERVKLLLQVQ 244
++GG+S A++ + P++ VK LLQ +
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTR 235
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/81 (20%), Positives = 32/81 (39%)
Frame = +3
Query: 489 CRRSHLSCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSV 668
C + F+ P D + R+ R++ +C + +F+++GL Y + +
Sbjct: 122 CAITISDAFMTPFDVIKQRMQLP------SRKYKSALHCATTVFRNEGLGAFYISYPTCI 175
Query: 669 QGIIIYRASYFGFYDTARGML 731
I + A YDT L
Sbjct: 176 AMSIPFTAIQVATYDTCMSFL 196
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.55
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +1
Query: 262 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 441
A Y DAF +I K +GL +F+RG F ++ + F + +K K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 442 KTQF 453
K+ F
Sbjct: 284 KSNF 287
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 155 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 244
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 283 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 444
G + + I +G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 53 GTLSSMRTIFHNEGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 612 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 737
KI+K +GL YRG S+ G ++ F Y+ + L D
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDD 279
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 29.5 bits (63), Expect = 0.55
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 244 ARQQQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP---TQALNFAFKDKYK 414
AR+ + A K + D + G + FW G F + + F AL
Sbjct: 200 ARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLSQSFKLHLADALCLGVSANGD 259
Query: 415 QVFLGGVDKKT 447
VF G+D+KT
Sbjct: 260 MVFSSGIDRKT 270
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 0.97
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 164 LAGGISAAVSKTAVAPIERVKLLLQV 241
LAGGIS+ + + +AP + +K+ +Q+
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQI 46
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 516 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRAS 695
++PLD A+ ++ A + + D + F S I + + LY G ++V G +
Sbjct: 18 MHPLDLAKIQMQASMNQ-DSKSLFQVFK---SNIGSNGSIRSLYHGLSINVLGSAASWGA 73
Query: 696 YFGFYDTAR 722
YF YD ++
Sbjct: 74 YFCIYDFSK 82
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 591 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDP 740
G G ++I+K G GL+ G GV + I + + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
Score = 26.2 bits (55), Expect = 5.2
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +3
Query: 477 GLRWCRRSHLSCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 656
GL C +H + + PLD + R + G +G +SK +GL GLY G
Sbjct: 30 GLLACGTTHSA--ITPLDLIKCRKQVNPNIYPGN--IAGFKTILSK----EGLRGLYTGG 81
Query: 657 GVSVQGIIIYRASYFGFYD 713
++ G + +GFY+
Sbjct: 82 MPTLIGYSLQGCGKYGFYE 100
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 606 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 731
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.4 bits (53), Expect = 9.0
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 723 GMLPDPKNTPIV 758
GMLPDPK+ P++
Sbjct: 89 GMLPDPKSIPVI 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,630,206
Number of Sequences: 5004
Number of extensions: 48232
Number of successful extensions: 211
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -