Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0682
(726 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 108 1e-22
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 101 2e-20
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 99 1e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 98 2e-19
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 98 2e-19
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 98 2e-19
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 96 7e-19
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 96 7e-19
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 2e-17
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 86 7e-16
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 85 1e-15
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 83 5e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 7e-15
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 83 9e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 82 1e-14
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 82 2e-14
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 79 1e-13
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 77 3e-13
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 76 8e-13
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 75 1e-12
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 75 2e-12
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 75 2e-12
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 74 3e-12
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 74 3e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 73 5e-12
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 72 2e-11
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 71 4e-11
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 71 4e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 69 1e-10
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 69 2e-10
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 68 3e-10
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 68 3e-10
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 67 5e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 5e-10
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 66 6e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 65 1e-09
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 65 2e-09
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 64 3e-09
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 64 4e-09
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 63 6e-09
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 63 8e-09
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 63 8e-09
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 62 1e-08
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 62 1e-08
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 61 2e-08
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 61 3e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 60 4e-08
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 60 7e-08
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 60 7e-08
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 59 1e-07
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 58 2e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 58 2e-07
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 58 2e-07
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 58 3e-07
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 57 4e-07
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 57 5e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 7e-07
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 56 9e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 56 9e-07
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 56 9e-07
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 56 1e-06
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 1e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 56 1e-06
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 55 2e-06
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 55 2e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 55 2e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 55 2e-06
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 53 6e-06
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 53 8e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 53 8e-06
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 53 8e-06
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 52 1e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 52 1e-05
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 51 3e-05
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 51 3e-05
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 51 3e-05
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 50 4e-05
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 50 6e-05
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 50 6e-05
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 50 8e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 48 3e-04
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 47 4e-04
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 47 4e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 47 5e-04
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 46 7e-04
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 46 0.001
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 43 0.007
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.009
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 42 0.016
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.021
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.083
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 39 0.11
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.33
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.77
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.77
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.77
UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2; ... 36 1.0
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 36 1.0
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 36 1.0
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 35 1.8
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.4
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 35 2.4
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 2.4
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 3.1
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 34 3.1
UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE P... 34 4.1
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 34 4.1
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 33 5.4
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 7.2
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 33 9.5
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 9.5
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 108 bits (260), Expect = 1e-22
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGFVFLFTVGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS +PLFT
Sbjct: 255 LGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFT 314
Query: 442 GLSLNSYILKIQF 480
G++LN++ LKIQF
Sbjct: 315 GVTLNNFFLKIQF 327
Score = 107 bits (257), Expect = 3e-22
Identities = 52/82 (63%), Positives = 59/82 (71%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHIISQE GKKE F F+V AHH+FTVG+D+DTRAYFTSAT+IIAV
Sbjct: 168 SHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDTRAYFTSATMIIAV 227
Query: 182 PTGIKIFR*LATIHGTQINYNP 247
PTGIK+F LAT HGTQI Y+P
Sbjct: 228 PTGIKVFSWLATFHGTQILYSP 249
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 101 bits (241), Expect = 2e-20
Identities = 47/73 (64%), Positives = 54/73 (73%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLFT
Sbjct: 342 LGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFT 401
Query: 442 GLSLNSYILKIQF 480
G +LNS KI F
Sbjct: 402 GYTLNSVWTKIHF 414
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 182 PTGIKIFR*LATIHGTQINY 241
PTG+K+F LAT+HG I +
Sbjct: 315 PTGVKVFSWLATLHGGAIKW 334
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/43 (58%), Positives = 30/43 (69%), Gaps = 6/43 (13%)
Frame = +3
Query: 462 YTKNSIFYNIYWS------KYKFFPQHFLGLAGIPRRYSDYPD 572
YT NS++ I++ FFPQHFLGLAG+PRRYSDYPD
Sbjct: 403 YTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 99.1 bits (236), Expect = 1e-19
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 423
P L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS +
Sbjct: 337 PPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTH 396
Query: 424 *YPLFTGLSLNSYILKIQF 480
+PLFTG +LNS K F
Sbjct: 397 WFPLFTGYTLNSAWAKAHF 415
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGLAG+PRRYSDYPD
Sbjct: 426 FFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 98.3 bits (234), Expect = 2e-19
Identities = 43/74 (58%), Positives = 53/74 (71%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+FLFTVGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS +P+F
Sbjct: 326 MGFIFLFTVGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFF 385
Query: 442 GLSLNSYILKIQFF 483
GL +N Y LKI F+
Sbjct: 386 GLMMNEYFLKIHFY 399
Score = 91.1 bits (216), Expect = 3e-17
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SH+I E GKKETF FIV AHH+FT+G+D+DTRAYFTSAT+IIA+
Sbjct: 239 SHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVDTRAYFTSATMIIAI 298
Query: 182 PTGIKIFR*LATIHGTQINYN 244
PTGIKIF +AT G ++ N
Sbjct: 299 PTGIKIFSWMATFSGVKLMNN 319
Score = 50.0 bits (114), Expect = 6e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGL+G+PRRYSDYPD
Sbjct: 409 FFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 97.9 bits (233), Expect = 2e-19
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 423
P L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS +
Sbjct: 337 PPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTH 396
Query: 424 *YPLFTGLSLNSYILKIQF 480
+PLFTG +LN+ K F
Sbjct: 397 WFPLFTGYTLNNAWAKAHF 415
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 122 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 247
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDP 337
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGLAG+PRRYSDYPD
Sbjct: 426 FFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 97.9 bits (233), Expect = 2e-19
Identities = 46/73 (63%), Positives = 53/73 (72%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLFTVGGLTG++LANSSIDI LHDTYYVVAHFHYVLS + +PLFT
Sbjct: 342 LGFIFLFTVGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFT 401
Query: 442 GLSLNSYILKIQF 480
G +L+ KI F
Sbjct: 402 GYTLHDTWTKIHF 414
Score = 91.1 bits (216), Expect = 3e-17
Identities = 42/80 (52%), Positives = 54/80 (67%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SH+++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 182 PTGIKIFR*LATIHGTQINY 241
PTG+K+F LAT+HG I +
Sbjct: 315 PTGVKVFSWLATLHGGAIKW 334
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGLAG+PRRYSDYPD
Sbjct: 425 FFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 96.3 bits (229), Expect = 7e-19
Identities = 45/73 (61%), Positives = 54/73 (73%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLFTVGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 107 LGFIFLFTVGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFS 166
Query: 442 GLSLNSYILKIQF 480
G +L++ KI F
Sbjct: 167 GYTLHNTWTKIHF 179
Score = 92.3 bits (219), Expect = 1e-17
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 20 SHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 79
Query: 182 PTGIKIFR*LATIHGTQINYN 244
PTG+K+F LAT+HG I ++
Sbjct: 80 PTGVKVFSWLATLHGGSIKWD 100
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 96.3 bits (229), Expect = 7e-19
Identities = 44/73 (60%), Positives = 53/73 (72%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 342 LGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFS 401
Query: 442 GLSLNSYILKIQF 480
G +L+ KI F
Sbjct: 402 GYTLDQTYAKIHF 414
Score = 92.3 bits (219), Expect = 1e-17
Identities = 42/81 (51%), Positives = 56/81 (69%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI++ GKKE F FIV AHH+FTVG+D+DTRAYFTSAT+IIA+
Sbjct: 255 SHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAI 314
Query: 182 PTGIKIFR*LATIHGTQINYN 244
PTG+K+F LAT+HG+ + ++
Sbjct: 315 PTGVKVFSWLATLHGSNMKWS 335
Score = 50.0 bits (114), Expect = 6e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGL+G+PRRYSDYPD
Sbjct: 425 FFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.5 bits (217), Expect = 2e-17
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGFVFLFT+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+
Sbjct: 319 LGFVFLFTLGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFS 378
Query: 442 GLSLN 456
G +L+
Sbjct: 379 GYNLH 383
Score = 87.0 bits (206), Expect = 4e-16
Identities = 39/85 (45%), Positives = 56/85 (65%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SH+I+ GK+E F F+V AHH+FTVG+D+DTRAYFT+AT+IIAV
Sbjct: 232 SHVIAHYSGKREPFGYLGMVYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAV 291
Query: 182 PTGIKIFR*LATIHGTQINYNPNIY 256
PTGIK+F +AT+ G+ + + ++
Sbjct: 292 PTGIKVFSWMATLQGSNLQWETPLF 316
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 86.2 bits (204), Expect = 7e-16
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
P L LGFVFLFTVGGLTGV+LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 40 PSLLWALGFVFLFTVGGLTGVVLANSSLDIVLHDTYYVVAHFHYVLS 86
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/42 (73%), Positives = 38/42 (90%)
Frame = +2
Query: 128 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSL 42
Score = 39.5 bits (88), Expect = 0.083
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 399 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYKFFPQHFLGLA 539
C Y IY L+ FI K L KNSIF NI+ K+ FP FL ++
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSIS 138
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 85.4 bits (202), Expect = 1e-15
Identities = 48/104 (46%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 1 FSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLSSSYIHCXXXXXXXXXXXXXXXXXXX 180
FSYYF K KK N W+F +NLCY SNW+I IYCLSSSYI+
Sbjct: 48 FSYYFPSKSKKGNLWVFSDNLCYISNWIISIYCLSSSYIYSSNSYWYSTYFTSATMIIAV 107
Query: 181 XXXXXXF-*MTSYNTWNSN*L*P*YL*RLGFVFLFTVGGLTGVI 309
F + +++ N P L LGFVFLFTVGGLTGVI
Sbjct: 108 PTGIKIFSWLATFHGTQIN-YSPSILWSLGFVFLFTVGGLTGVI 150
Score = 63.3 bits (147), Expect = 6e-09
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +2
Query: 149 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+I
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSI 131
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 83.4 bits (197), Expect = 5e-15
Identities = 38/75 (50%), Positives = 50/75 (66%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+FLFT+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + T
Sbjct: 349 IGFIFLFTIGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKIT 408
Query: 442 GLSLNSYILKIQFFT 486
GL + +I F++
Sbjct: 409 GLQYPETLGQIHFWS 423
Score = 74.9 bits (176), Expect = 2e-12
Identities = 39/73 (53%), Positives = 48/73 (65%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI+S +K F FIV AHH++TVG+D+DTRAYFT+AT+IIAV
Sbjct: 263 SHIVSTF-SRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVGLDVDTRAYFTAATMIIAV 321
Query: 182 PTGIKIFR*LATI 220
PTGIKIF +ATI
Sbjct: 322 PTGIKIFSWIATI 334
Score = 41.5 bits (93), Expect = 0.021
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
F P HFLGLAG+PRR DYPD
Sbjct: 432 FMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.0 bits (196), Expect = 7e-15
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
LGF+FLFT+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS
Sbjct: 309 LGFIFLFTIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLS 349
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 238
FIV A H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRN 298
Score = 50.4 bits (115), Expect = 4e-05
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGLAG+PRRY+DYPD
Sbjct: 392 FFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/74 (50%), Positives = 48/74 (64%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLFTVGG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +
Sbjct: 384 LGFIFLFTVGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMS 443
Query: 442 GLSLNSYILKIQFF 483
G N ++ ++ F+
Sbjct: 444 GKMYNEFLGQLHFW 457
Score = 66.1 bits (154), Expect = 8e-10
Identities = 28/50 (56%), Positives = 40/50 (80%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F+V AHH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++
Sbjct: 327 FVVWAHHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISF 376
Score = 44.4 bits (100), Expect = 0.003
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFP HFLGL+G+PRRY DYP+
Sbjct: 467 FFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 82.2 bits (194), Expect = 1e-14
Identities = 41/80 (51%), Positives = 48/80 (60%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN 423
P L LGFVF+FT+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS
Sbjct: 336 PSLLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYF 395
Query: 424 *YPLFTGLSLNSYILKIQFF 483
P GL N K F+
Sbjct: 396 WIPKILGLDYNLLYSKAHFW 415
Score = 78.6 bits (185), Expect = 1e-13
Identities = 33/54 (61%), Positives = 47/54 (87%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
F+V +HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++
Sbjct: 285 FVVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSL 338
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = +3
Query: 459 LYTKNSIFYNIYWSKYKFFPQHFLGLAGIPRRYSDYPD 572
LY+K + FFPQHFLGL G+PRR SDYPD
Sbjct: 408 LYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 81.8 bits (193), Expect = 2e-14
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
+GF+FLFT+GGLTG++LANS +DI LHDTYYVVAHFHYVLS
Sbjct: 344 VGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLS 384
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/80 (52%), Positives = 51/80 (63%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI+S GK F F+V AHH+FTVG+D+DTRAYFT+AT+IIAV
Sbjct: 258 SHIVSTFSGKP-VFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAV 316
Query: 182 PTGIKIFR*LATIHGTQINY 241
PTGIKIF +AT+ G I Y
Sbjct: 317 PTGIKIFSWIATMWGGSIQY 336
Score = 42.7 bits (96), Expect = 0.009
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFP HFLGL+G+PRR DYPD
Sbjct: 427 FFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 79.0 bits (186), Expect = 1e-13
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+FLFTVGG+TGV L+ S++DI HDT++VVAHFHYVLS +P
Sbjct: 433 VGFIFLFTVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIV 492
Query: 442 GLSLNSYILK 471
G SLN Y+L+
Sbjct: 493 GYSLNKYLLQ 502
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
+V HH+F VG D T +F+S T+II VPTGIK+F
Sbjct: 376 VVWGHHMFMVGFDSLTGVFFSSITMIIGVPTGIKVF 411
Score = 33.1 bits (72), Expect = 7.2
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDY 566
FFP H+LG+ G+PRR S Y
Sbjct: 516 FFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/74 (51%), Positives = 47/74 (63%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGFV +FT+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P
Sbjct: 368 LGFVVMFTIGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKII 427
Query: 442 GLSLNSYILKIQFF 483
GLS ++ KI F+
Sbjct: 428 GLSYDTKASKIHFW 441
Score = 75.4 bits (177), Expect = 1e-12
Identities = 31/50 (62%), Positives = 44/50 (88%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
FIV +HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++
Sbjct: 311 FIVWSHHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHF 360
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGL G+PRR SDYPD
Sbjct: 451 FFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 76.2 bits (179), Expect = 8e-13
Identities = 40/78 (51%), Positives = 49/78 (62%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI+S KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHIVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAI 314
Query: 182 PTGIKIFR*LATIHGTQI 235
PTGIKIF LATI+G I
Sbjct: 315 PTGIKIFSWLATIYGGSI 332
Score = 49.2 bits (112), Expect = 1e-04
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHD 345
+ F+FLFTVGGLTGV+LAN+S+D+ HD
Sbjct: 342 IAFLFLFTVGGLTGVVLANASLDVAFHD 369
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/75 (50%), Positives = 49/75 (65%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI+S GK F F+V +HH++ VG+D+DTRAYFT+AT+IIAV
Sbjct: 255 SHIVSAFSGKP-VFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAV 313
Query: 182 PTGIKIFR*LATIHG 226
PTGIKIF LAT++G
Sbjct: 314 PTGIKIFSWLATLYG 328
Score = 53.2 bits (122), Expect = 6e-06
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYY 354
LGF+ LFT+GGLTGVILAN+S+D+ LHD Y
Sbjct: 341 LGFIALFTIGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +2
Query: 131 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSL 41
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI+ + K F F+V HH+F G+DIDTRAYFT+AT++IAV
Sbjct: 258 SHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDIDTRAYFTAATLMIAV 317
Query: 182 PTGIKIFR*LATIHG 226
PTG+K+F LATI G
Sbjct: 318 PTGVKVFNWLATIFG 332
Score = 72.9 bits (171), Expect = 7e-12
Identities = 33/62 (53%), Positives = 42/62 (67%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+G V LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +T
Sbjct: 348 IGVVLLFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWT 407
Query: 442 GL 447
G+
Sbjct: 408 GM 409
Score = 44.0 bits (99), Expect = 0.004
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +3
Query: 504 YKFFPQHFLGLAGIPRRYSDYPD 572
+ FFP H++GL G+PRRY DYPD
Sbjct: 429 FTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 74.1 bits (174), Expect = 3e-12
Identities = 43/85 (50%), Positives = 46/85 (54%)
Frame = +1
Query: 211 SYNTWNSN*L*P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXX 390
SY + N N P F GGLTGVILANSS DI LHDTYYVVAH HYVLS
Sbjct: 243 SYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSXDIILHDTYYVVAHXHYVLSMG 302
Query: 391 XXXXXXXXXXN*YPLFTGLSLNSYI 465
+PLFTGL+L I
Sbjct: 303 AVFAILAGIVQWFPLFTGLTLTMNI 327
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/71 (49%), Positives = 45/71 (63%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGL 447
F+FLFTVGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+
Sbjct: 354 FIFLFTVGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGI 413
Query: 448 SLNSYILKIQF 480
S +S ++ F
Sbjct: 414 SFDSVMMMAVF 424
Score = 60.1 bits (139), Expect = 5e-08
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 247
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQP 346
Score = 38.3 bits (85), Expect = 0.19
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFP HF GL G+PR+ DYPD
Sbjct: 435 FFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 73.3 bits (172), Expect = 5e-12
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 247
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTP 395
Score = 50.0 bits (114), Expect(2) = 1e-06
Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 14/54 (25%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGL--------------TGVILANSSIDITLHDTYYVVA 363
P L LGFVFLFT+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 395 PVMLFSLGFVFLFTIGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGL G+PRR SDYPD
Sbjct: 532 FFPQHFLGLQGMPRRISDYPD 552
Score = 25.4 bits (53), Expect(2) = 1e-06
Identities = 13/47 (27%), Positives = 20/47 (42%)
Frame = +1
Query: 343 DTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTGLSLNSYILKIQFF 483
+T + HFHYVLS P G + + + K+QF+
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFW 522
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 71.7 bits (168), Expect = 2e-11
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 444
GFV LFT+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TG
Sbjct: 346 GFVVLFTIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTG 405
Query: 445 LSLNSYILKIQFF 483
LS + + + F+
Sbjct: 406 LSYSESLGQAHFW 418
Score = 69.7 bits (163), Expect = 7e-11
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHII+ KK F FIV AHH++T GID T+AYFT+AT++IA+
Sbjct: 259 SHIIATF-SKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTSTKAYFTAATMVIAI 317
Query: 182 PTGIKIFR*LATIHGTQI-NYNP 247
PTGIK+F +AT+ G I Y P
Sbjct: 318 PTGIKVFNWIATMWGGSIWMYTP 340
Score = 40.7 bits (91), Expect = 0.036
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 504 YKFFPQHFLGLAGIPRRYSDYPD 572
+ FFP HFLG G+PRR DYPD
Sbjct: 426 FTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/41 (68%), Positives = 35/41 (85%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
LGF+FLFT+GG TG+IL+ + +D HDTYYVVAHFHYV+S
Sbjct: 447 LGFIFLFTLGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMS 487
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/80 (40%), Positives = 46/80 (57%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SHI++ KK F F+V AHH++TVG+ + +AYF AT++IAV
Sbjct: 361 SHIVATF-SKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVGMTLTQQAYFMVATMVIAV 419
Query: 182 PTGIKIFR*LATIHGTQINY 241
PTGIKIF +AT+ I++
Sbjct: 420 PTGIKIFSWIATMWMGSISF 439
Score = 44.4 bits (100), Expect = 0.003
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLG G+PRRY DYPD
Sbjct: 530 FFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+ F+ +F +GG+TG++LANS +D+ +HD+YYVVAHFHYVLS + + L +
Sbjct: 98 VAFLLMFLLGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCS 157
Query: 442 GLSLNSYILKIQ 477
G +++L++Q
Sbjct: 158 GYRSAAWLLRVQ 169
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/37 (64%), Positives = 33/37 (89%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
+ V AHH+FTVG+D+DTR YF+SAT++IA+PT IK+F
Sbjct: 42 YFVWAHHMFTVGLDVDTRVYFSSATLLIALPTSIKVF 78
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +2
Query: 2 SHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAV 181
SH++S KK F F+V +HH++ VG+D DTRAYFTSAT+IIA+
Sbjct: 256 SHVVSTY-SKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVGLDADTRAYFTSATMIIAI 314
Query: 182 PTGIKIFR*LATIHGTQINYNPN 250
PTGIKIF L N N N
Sbjct: 315 PTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 68.5 bits (160), Expect = 2e-10
Identities = 27/41 (65%), Positives = 35/41 (85%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
L F+ LFT+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 56 LCFILLFTLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLS 96
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 104 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 217
AHH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGT 39
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/74 (41%), Positives = 44/74 (59%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF +F +GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FT
Sbjct: 363 LGFFLIFIIGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFT 422
Query: 442 GLSLNSYILKIQFF 483
G ++ + K+ F+
Sbjct: 423 GRMMSERLGKVAFW 436
Score = 40.7 bits (91), Expect = 0.036
Identities = 16/42 (38%), Positives = 31/42 (73%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ 232
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSK 352
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +2
Query: 11 ISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTG 190
I Q KK F F V +HH+FTVG+D D+RAYF+ A++IIA+PTG
Sbjct: 275 IVQVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVGLDADSRAYFSGASLIIAIPTG 334
Query: 191 IKIFR*LATIHGTQINY-NPNIY 256
KIF LATI+G + + P +Y
Sbjct: 335 SKIFSWLATIYGGTLRWTTPLLY 357
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVA 363
+GF+ LFT+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 359 VGFIVLFTIGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/40 (70%), Positives = 35/40 (87%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
LGF+F+FTVGG+TGV++A ID +HDTY+VVAHFHYVL
Sbjct: 369 LGFLFIFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVL 408
Score = 41.9 bits (94), Expect = 0.016
Identities = 16/38 (42%), Positives = 29/38 (76%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
HH+FT GI + +F++A++ +A+P+GI++F +ATI
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATI 352
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFP H GL G+PRR YPD
Sbjct: 452 FFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 66.9 bits (156), Expect = 5e-10
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
F+ FT GG TGVIL N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 350 FICTFTFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLS 388
Score = 58.4 bits (135), Expect = 2e-07
Identities = 22/41 (53%), Positives = 33/41 (80%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 217
+V HH++T G+++DTRAYFTS TI+I++PTG K+F + T
Sbjct: 291 LVWVHHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICT 331
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
F P HFLG +PRR DYPD
Sbjct: 432 FLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 66.5 bits (155), Expect = 6e-10
Identities = 27/39 (69%), Positives = 32/39 (82%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
F+ FT GG TGVIL N +ID+ LHDTYYV+AHFH+VLS
Sbjct: 54 FICTFTFGGTTGVILGNGAIDVALHDTYYVIAHFHFVLS 92
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +2
Query: 113 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGT 229
++T G+++DTRA+FTS TI+I++PTG K+F L T T
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMST 39
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
F P HFLG +PRR DYPD
Sbjct: 136 FLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.3 bits (152), Expect = 1e-09
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
+V AHH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L+++
Sbjct: 269 VVWAHHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSL 310
Score = 59.7 bits (138), Expect = 7e-08
Identities = 23/42 (54%), Positives = 34/42 (80%)
Frame = +1
Query: 259 RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
++ F+ F +GG +G+IL+N+S+D LHDTYYVVAHFH V++
Sbjct: 325 QVSFIVSFAIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/74 (44%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+FLF +GGLTGV LA S+ + L +TYYVV HFHYV++ +P T
Sbjct: 342 LGFIFLFLIGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMT 401
Query: 442 GLSLNSYILKIQFF 483
G N I K F+
Sbjct: 402 GKMYNETIGKWAFW 415
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/73 (39%), Positives = 41/73 (56%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
L FV +F +GGL+G+ +A + +DI +HDTY++VAHFHYVL +P
Sbjct: 390 LSFVSMFVIGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMF 449
Query: 442 GLSLNSYILKIQF 480
G +N KI F
Sbjct: 450 GRMMNETAGKIHF 462
Score = 41.9 bits (94), Expect = 0.016
Identities = 18/50 (36%), Positives = 31/50 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
FIV HH+F G++ F AT++IA+P+ +K F L T++G ++ +
Sbjct: 333 FIVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQF 382
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/39 (64%), Positives = 32/39 (82%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
F+F+F +G +TG+ L+N IDI LHDTY+VV HFHYVLS
Sbjct: 346 FIFMFLIGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLS 384
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/33 (54%), Positives = 27/33 (81%)
Frame = +2
Query: 104 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
AHH+F VG+D+D+RAYF +I+I +PT +K+F
Sbjct: 291 AHHMFVVGMDVDSRAYFGGVSILIGLPTCVKLF 323
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +3
Query: 498 SKYKFFPQHFLGLAGIPRRYSDYP 569
S FFP H LG+ PRR SDYP
Sbjct: 423 SNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 63.3 bits (147), Expect = 6e-09
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 223 WNSN*-L*P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXX 399
WN N L L +GFV F +GG+TGV LA+ +D+ LH TYYVV HFHY++
Sbjct: 412 WNGNIRLTTPMLFSVGFVANFILGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAF 471
Query: 400 XXXXXXXN*YPLFTGLSLNSYILKIQFF 483
+PL+TG + K+ F+
Sbjct: 472 AGFAGIYYWFPLYTGRMYQRTLGKMHFW 499
Score = 39.9 bits (89), Expect = 0.063
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
F V AHH+F G+D RA F + ++ IAVP+ +K F + T+
Sbjct: 369 FGVWAHHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTM 411
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+G V +F GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P
Sbjct: 403 IGLVSMFISGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMF 462
Query: 442 GLSLNSYILKIQFF 483
G ++ + I F+
Sbjct: 463 GRMMDEKLGYIHFW 476
Score = 40.7 bits (91), Expect = 0.036
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 247
FIV AHH+F G++ + F T+IIAVP+ +K F + T+ I + P
Sbjct: 346 FIVWAHHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTP 397
Score = 33.9 bits (74), Expect = 4.1
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRY 557
FFP H++G+AG PRRY
Sbjct: 486 FFPMHYIGIAGFPRRY 501
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 444
GF+ F +GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG
Sbjct: 353 GFLSSFMIGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTG 412
Query: 445 LSLNSYILKIQF 480
+N + ++ F
Sbjct: 413 RMVNEPLGRLHF 424
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 244
IV AHH+FT G R +F + T++IAVPTGIKIF T+ G +I N
Sbjct: 296 IVWAHHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLN 345
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/40 (60%), Positives = 33/40 (82%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
+GF+ +F +GGLTGV++A+ D +HDTY+VVAHFHYVL
Sbjct: 357 IGFIVVFVIGGLTGVMVASVPFDTQVHDTYFVVAHFHYVL 396
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
HH+F G+ ++FT++++ IAVP G++IF LATI
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATI 342
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/74 (40%), Positives = 39/74 (52%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+ F GGLTG+ L N +D+ L DT +VVAHFH V+ + YP T
Sbjct: 381 LGFIITFVNGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVT 440
Query: 442 GLSLNSYILKIQFF 483
G LN + K F+
Sbjct: 441 GRMLNDVLGKFHFW 454
Score = 39.5 bits (88), Expect = 0.083
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HG 226
F+V AHH++ G+ +F + T+IIA+PT IK++ + T+ HG
Sbjct: 324 FVVWAHHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHG 369
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFP H+LGL G+PRRY + D
Sbjct: 464 FFPMHYLGLLGVPRRYFELGD 484
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 61.3 bits (142), Expect = 2e-08
Identities = 29/75 (38%), Positives = 40/75 (53%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GFV F +GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ T
Sbjct: 395 IGFVQNFIIGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVT 454
Query: 442 GLSLNSYILKIQFFT 486
G + F+T
Sbjct: 455 GRMYQKRLAHAHFWT 469
Score = 41.5 bits (93), Expect = 0.021
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
F V AHH+FT GID R+ F + ++ I++P+ +K+F + T+
Sbjct: 338 FGVWAHHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTM 380
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/74 (40%), Positives = 40/74 (54%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+ +F GG++G LA SIDI LH TY+VV HFH V+ +P T
Sbjct: 389 LGFISMFVSGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMT 448
Query: 442 GLSLNSYILKIQFF 483
G +N + KI F+
Sbjct: 449 GHMMNETLGKIHFW 462
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 60.5 bits (140), Expect = 4e-08
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
F+ F +GG TGV+L N+ ID+ LHDT YVV HFH+VLS
Sbjct: 350 FIVNFVIGGTTGVVLGNAGIDLALHDTVYVVGHFHFVLS 388
Score = 33.9 bits (74), Expect = 4.1
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
F P HF G + +PRR DYPD
Sbjct: 432 FLPMHFTGFSPLPRRIPDYPD 452
Score = 33.5 bits (73), Expect = 5.4
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2
Query: 149 YFTSATIIIAVPTGIKIFR*LATI 220
YFT+ TI+IA+PTG KIF + T+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTL 332
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 59.7 bits (138), Expect = 7e-08
Identities = 31/74 (41%), Positives = 40/74 (54%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+ F+ F +GGLTG++ A ID L DTY+VVAHFHYVL +P T
Sbjct: 360 VAFLLQFVIGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMT 419
Query: 442 GLSLNSYILKIQFF 483
G LN I +QF+
Sbjct: 420 GRMLNERIGILQFW 433
Score = 52.0 bits (119), Expect = 1e-05
Identities = 20/51 (39%), Positives = 35/51 (68%)
Frame = +2
Query: 104 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIY 256
AHH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N +++
Sbjct: 307 AHHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLH 357
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 59.7 bits (138), Expect = 7e-08
Identities = 30/73 (41%), Positives = 40/73 (54%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 444
GFV +F VGG++GV+ A +D L DTY+VVAH HYVL +P FTG
Sbjct: 378 GFVLMFVVGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTG 437
Query: 445 LSLNSYILKIQFF 483
+N K+ F+
Sbjct: 438 RMMNERFGKLTFW 450
Score = 37.9 bits (84), Expect = 0.25
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIY 256
F V HH+F GI A+F +A+++I++P+ + +F +ATI G + P +Y
Sbjct: 320 FEVWVHHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLY 375
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 58.8 bits (136), Expect = 1e-07
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LG VF+F VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P
Sbjct: 379 LGTVFVFGVGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMF 438
Query: 442 GLSLNSYILKIQFF 483
G L + KI F+
Sbjct: 439 GRRLGERLGKIHFW 452
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/74 (36%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+F F +GG+TGV+L+ + +D HD+Y+VVAHFH VL +P T
Sbjct: 351 LGFIFNFLLGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMT 410
Query: 442 GLSLNSYILKIQFF 483
G + + ++ F+
Sbjct: 411 GRMYDERLGRLHFW 424
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIY 256
+V AHH+FTVG + F T +IAVPTG+K+F + T+ G ++ +Y
Sbjct: 295 MVWAHHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLY 348
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+ +F +GG++GV LA+ I++ D+YYVVAH HYVL +P T
Sbjct: 359 IGFISMFIIGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMT 418
Query: 442 GLSLNSYILKIQFF 483
G L+ + K QF+
Sbjct: 419 GRMLDERLGKWQFW 432
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 238
F+V AHH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N
Sbjct: 302 FLVWAHHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLN 350
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 58.0 bits (134), Expect = 2e-07
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+F+F +GG+TGV++A ++ HD+Y+VVAH HYVL P FT
Sbjct: 383 LGFLFIFVLGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFT 442
Query: 442 GLSLNSYILKIQFF 483
G ++ + K F+
Sbjct: 443 GRMMSERLGKWVFW 456
Score = 42.3 bits (95), Expect = 0.012
Identities = 17/39 (43%), Positives = 30/39 (76%)
Frame = +2
Query: 104 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
AHH+F G+ I + + F++A+ ++AVPTG++IF +AT+
Sbjct: 330 AHHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATL 368
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 57.6 bits (133), Expect = 3e-07
Identities = 25/73 (34%), Positives = 39/73 (53%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+ F+ +F VGGL+G+ +A +D+ HDTY++VAHFHY+L +P
Sbjct: 393 IAFLSMFIVGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMF 452
Query: 442 GLSLNSYILKIQF 480
G +N + K F
Sbjct: 453 GRMMNEKLGKTHF 465
Score = 43.6 bits (98), Expect = 0.005
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 244
FIV HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N
Sbjct: 336 FIVWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFN 386
Score = 37.1 bits (82), Expect = 0.44
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSD 563
FFP HFLG+ G+PRRY+D
Sbjct: 476 FFPMHFLGMQGMPRRYAD 493
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 57.2 bits (132), Expect = 4e-07
Identities = 20/39 (51%), Positives = 30/39 (76%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
GF+F GG+TG+ LA S+D+ HDTY++VAHFH+++
Sbjct: 361 GFLFFLVFGGMTGIALATVSLDVHWHDTYFIVAHFHFIM 399
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 56.8 bits (131), Expect = 5e-07
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
LGF+F+F +GGLTGV++A D HD+Y++VAH HYVL
Sbjct: 430 LGFLFIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVL 469
Score = 37.5 bits (83), Expect = 0.33
Identities = 14/37 (37%), Positives = 27/37 (72%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT 217
HH+FT GI + ++F +A+ +A+P+G+++F +AT
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIAT 410
Score = 33.5 bits (73), Expect = 5.4
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDY 566
FFP HF GLAG+PRR Y
Sbjct: 513 FFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.4 bits (130), Expect = 7e-07
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 268 FVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
F+ F GG TG++L++ S+DI LHDTY+VV HFH VLS
Sbjct: 354 FLICFCFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLS 392
Score = 55.6 bits (128), Expect = 1e-06
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
+ V AHH+FTVG+DID+R+YF+ AT II++PT +K+F
Sbjct: 294 YFVWAHHMFTVGLDIDSRSYFSIATSIISIPTSVKMF 330
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 56.0 bits (129), Expect = 9e-07
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
GF+F GG+TG+ L S+D+ HDTY+VVAHFH+++
Sbjct: 368 GFLFFTVFGGMTGIALGTVSLDVAWHDTYFVVAHFHFIM 406
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.0 bits (129), Expect = 9e-07
Identities = 22/44 (50%), Positives = 34/44 (77%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN 238
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVN 96
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+ F GGLTG++LA+ +D L D+Y+++AHFHY L +P T
Sbjct: 364 VGFMATFLFGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMT 423
Query: 442 GLSLNSYILKIQFF 483
G ++ + KI F+
Sbjct: 424 GRMMDERLGKIHFW 437
Score = 33.5 bits (73), Expect = 5.4
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 104 AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
AHH+F G + +F+ T +I+VPTG+K F + T+
Sbjct: 313 AHHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTM 349
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LG VF+F +GGLTG+ L +ID+ + D+ +VV HFHYVL + +PL T
Sbjct: 297 LGGVFMFLIGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLAT 356
Query: 442 GLSLNSYILKIQFF 483
G + K+ F+
Sbjct: 357 GKYYPENLGKLSFW 370
Score = 46.4 bits (105), Expect = 7e-04
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F + HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++
Sbjct: 240 FFLWIHHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHF 289
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 55.6 bits (128), Expect = 1e-06
Identities = 31/77 (40%), Positives = 39/77 (50%)
Frame = +1
Query: 250 YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*Y 429
+L LG + LF +GG+TGV L +D TY+VVAHFHYV+ Y
Sbjct: 359 FLFSLGALILFIIGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWY 417
Query: 430 PLFTGLSLNSYILKIQF 480
P TG N + KIQF
Sbjct: 418 PKITGKMYNETLGKIQF 434
Score = 34.3 bits (75), Expect = 3.1
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F+V HH+F GI++ + F + TI I++P + +F + T+ ++ +
Sbjct: 306 FVVWMHHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRF 355
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/73 (38%), Positives = 40/73 (54%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+ F+ F +GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P
Sbjct: 350 VSFIPSFVLGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMF 409
Query: 442 GLSLNSYILKIQF 480
G L+ + KI F
Sbjct: 410 GKILHETMGKISF 422
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/50 (50%), Positives = 31/50 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F+V HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y
Sbjct: 293 FMVWVHHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKY 342
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
+GF+ FT+GGL+G + A + D HDTY+VVAHFHYVL
Sbjct: 361 IGFIASFTIGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVL 400
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F V +HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI +
Sbjct: 304 FTVWSHHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRF 353
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 55.2 bits (127), Expect = 2e-06
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
L F+ F +GG+TGV+LA ++ D H+TY++V+HFHYVL YP
Sbjct: 381 LAFIPNFVIGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMF 440
Query: 442 GLSLNSYILKIQFF 483
G LN I K F+
Sbjct: 441 GHKLNERIGKWFFW 454
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F+V HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++
Sbjct: 324 FLVWTHHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISF 373
Score = 33.1 bits (72), Expect = 7.2
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDY 566
FFPQ+FLGL G+PRR Y
Sbjct: 464 FFPQYFLGLQGMPRRIYTY 482
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/45 (48%), Positives = 35/45 (77%)
Frame = +1
Query: 250 YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
+L + F+ LF V G TG+ L++ S+++++HDT+YVVAHFH +LS
Sbjct: 498 FLFSMSFLLLFLVAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLS 542
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/36 (36%), Positives = 26/36 (72%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKI 199
++V HH++ VG+D +R +++ TI+I++P IK+
Sbjct: 445 YLVWGHHMYLVGLDHRSRTMYSTITIMISMPATIKV 480
Score = 33.1 bits (72), Expect = 7.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYP 569
F PQ +LG +G+PRR DYP
Sbjct: 585 FVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 54.8 bits (126), Expect = 2e-06
Identities = 20/37 (54%), Positives = 30/37 (81%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
L F+FLF +GG+TG++LAN +D +H+T ++VAHFH
Sbjct: 405 LAFIFLFVIGGITGIMLANPILDYQVHNTVFLVAHFH 441
Score = 40.7 bits (91), Expect = 0.036
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN-PNIY 256
F+V HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ P IY
Sbjct: 348 FLVWLHHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIY 403
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = +2
Query: 113 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 53.2 bits (122), Expect = 6e-06
Identities = 26/73 (35%), Positives = 40/73 (54%)
Frame = +1
Query: 265 GFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 444
G + +FT GGLTGV++A + D +HDTY++VAH HY L YP+ T
Sbjct: 384 GGLAVFTAGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITK 443
Query: 445 LSLNSYILKIQFF 483
+L+ + + F+
Sbjct: 444 KALSERLGRWSFW 456
Score = 38.3 bits (85), Expect = 0.19
Identities = 14/38 (36%), Positives = 27/38 (71%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
HH+FT G+ + +F++A+ + +PTGI++F +AT+
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATL 368
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 52.8 bits (121), Expect = 8e-06
Identities = 27/73 (36%), Positives = 39/73 (53%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+G + F G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FT
Sbjct: 367 IGGLINFIFAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFT 426
Query: 442 GLSLNSYILKIQF 480
G + K+ F
Sbjct: 427 GKMYYEGLGKVHF 439
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN 244
IV AHH+F G R F T++IA+PTG+K+F L T+ + N
Sbjct: 311 IVWAHHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLN 360
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 52.8 bits (121), Expect = 8e-06
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 384
L F+ F VGG+TGV ++D+ LHDTY+V+ HFHY+++
Sbjct: 351 LTFLLFFIVGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVN 391
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 235
F V HH+FT D R AT+ +A+P+G+K+F +AT++G +I
Sbjct: 294 FAVWMHHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRI 341
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/74 (35%), Positives = 39/74 (52%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+ F++GG+TGV+LA D LH++ +V+AHFH V+ +P
Sbjct: 385 LGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAF 444
Query: 442 GLSLNSYILKIQFF 483
G +LN K F+
Sbjct: 445 GFTLNEKWGKAAFW 458
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
F V HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I
Sbjct: 328 FAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPI 381
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
L F F +GGLTGV++A D +HDTY++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVL 396
Score = 37.9 bits (84), Expect = 0.25
Identities = 15/38 (39%), Positives = 27/38 (71%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
HH+FT GI A+F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTL 342
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 226
+V AHH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 50 VVWAHHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 51.2 bits (117), Expect = 3e-05
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYPD 572
FFPQHFLGLAG+PRRYSDYPD
Sbjct: 414 FFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
LGF+ F++GG+TGV+LA D LH++ +++AHFH + +P
Sbjct: 386 LGFMVTFSIGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVF 445
Query: 442 GLSLNSYILKIQFF 483
G LN + K F+
Sbjct: 446 GFKLNDKLGKASFW 459
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/54 (40%), Positives = 35/54 (64%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI 253
F+V HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + I
Sbjct: 329 FMVWLHHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPI 382
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 134 IDTRAYFTSATIIIAVPTGIKIFR*LAT 217
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
Score = 42.7 bits (96), Expect = 0.009
Identities = 30/102 (29%), Positives = 38/102 (37%)
Frame = +3
Query: 234 LIITLIFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWG 413
L ++ +M I CIFIH + F CNY G
Sbjct: 36 LFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCFCNYIG 95
Query: 414 IY*LISFIYRPFIKFLYTKNSIFYNIYWSKYKFFPQHFLGLA 539
IY L+ I K L KNSIFYNI+ K F F ++
Sbjct: 96 IYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSIS 137
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/40 (52%), Positives = 28/40 (70%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
L F F +GGLTGV++A D +HDT+++VAH HYVL
Sbjct: 357 LAFFATFVIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVL 396
Score = 37.5 bits (83), Expect = 0.33
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
HH+FT GI A F++A+ ++AVPT +++F + T+
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTL 342
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/46 (50%), Positives = 34/46 (73%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
P L LG +FL VGGLTG++LA +I+ T+H++ +VVAHFH ++
Sbjct: 398 PPMLWALGALFLLLVGGLTGMMLAIPAINYTVHNSVFVVAHFHCMM 443
Score = 43.6 bits (98), Expect = 0.005
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP 247
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEP 398
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIF 202
+V HH+F VG D+ T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 49.6 bits (113), Expect = 8e-05
Identities = 26/73 (35%), Positives = 37/73 (50%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+G + F +GG TGV L + +ID TY+VVAHFHY+L +P T
Sbjct: 349 VGALLNFIIGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKIT 408
Query: 442 GLSLNSYILKIQF 480
G + + + KI F
Sbjct: 409 GRTYSERLGKIHF 421
Score = 37.5 bits (83), Expect = 0.33
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
F+V HH+F G +I TR +++ TI+I++P + + + T++ ++ Y
Sbjct: 292 FVVWMHHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVY 341
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/68 (35%), Positives = 34/68 (50%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+GF+F F +GG+TGV L D + +YYVVAHFH V+ +P T
Sbjct: 359 IGFIFNFLIGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMT 418
Query: 442 GLSLNSYI 465
G L+ +
Sbjct: 419 GRFLDEKV 426
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 95 IV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI 235
IV HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I
Sbjct: 303 IVWLHHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRI 349
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYP 569
F PQ+ LGL G+PRRY YP
Sbjct: 442 FLPQYILGLLGMPRRYYTYP 461
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/73 (34%), Positives = 33/73 (45%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFT 441
+G + LF G GV+ A +D T HDTY+VV HFH + +P T
Sbjct: 343 IGGIALFFSAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVT 402
Query: 442 GLSLNSYILKIQF 480
G N + KI F
Sbjct: 403 GRMYNEKLGKIHF 415
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 510 FFPQHFLGLAGIPRRYSDYP 569
FF QH LG+ G+PRR DYP
Sbjct: 426 FFTQHILGIYGMPRRVYDYP 445
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
+ F+ +F +GG+TGV ID L+ TY+VV HFHY++
Sbjct: 340 ISFIVMFLLGGITGVFFPLVPIDYALNGTYFVVGHFHYMV 379
Score = 37.1 bits (82), Expect = 0.44
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 107 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY 241
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRY 332
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 46.8 bits (106), Expect = 5e-04
Identities = 21/55 (38%), Positives = 30/55 (54%)
Frame = +1
Query: 280 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLFTG 444
F +GG++GV ++ +ID +H YYVVAHFHY + +P FTG
Sbjct: 376 FMIGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTG 430
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 46.4 bits (105), Expect = 7e-04
Identities = 15/40 (37%), Positives = 30/40 (75%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
+ F+ +F++GG +GVIL+ ++D H++ +++AHFH V+
Sbjct: 380 ISFIIIFSIGGFSGVILSIPNLDFIFHNSMFLIAHFHSVI 419
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 92 FIV*AHHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI 220
F+V HH FT+G + +F+ +T+IIA+PTG+KIF + TI
Sbjct: 323 FLVWLHHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTI 365
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1
Query: 280 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
F +GGLTG+ A+ D+ LH+TY+V+AHFH
Sbjct: 439 FLIGGLTGIFNADVPADLQLHNTYWVIAHFH 469
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 43.2 bits (97), Expect = 0.007
Identities = 28/91 (30%), Positives = 34/91 (37%)
Frame = +3
Query: 255 MKIRFCIFIHSRRINRCNFSQFFXXXXXXXXXXXXXXXXXXXXXXXXXCNYWGIY*LISF 434
+ FC FI+ N +FSQF CNY IY L+
Sbjct: 43 LSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLRSFNSSSICNYISIYPLMPP 102
Query: 435 IYRPFIKFLYTKNSIFYNIYWSKYKFFPQHF 527
+ F K KNSI+ NIY SK F F
Sbjct: 103 LNWTFYKSKMIKNSIYNNIYSSKSNIFSPTF 133
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = -1
Query: 228 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 97
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 41.9 bits (94), Expect = 0.016
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +1
Query: 1 FSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIYCLS 105
F YY+T K K W F NNLCY S W I +S
Sbjct: 24 FPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.021
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +1
Query: 277 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.083
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 271 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 39.1 bits (87), Expect = 0.11
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Frame = +1
Query: 262 LGFVFL-----FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
LG FL F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 103 LGMTFLIALIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.33
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +1
Query: 271 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.77
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 262 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.77
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 304 VILANSSIDITLHDTYYVVAHFHYV 378
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 36.3 bits (80), Expect = 0.77
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = +1
Query: 286 VGGLTGVILANSSIDITLHDTYYVVAHFH 372
+GG+TGV++ +++T H+T+ V HFH
Sbjct: 371 MGGITGVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 971
Score = 35.9 bits (79), Expect = 1.0
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1
Query: 567 DNLNIVEVFQLNLKNVVEKIYIYSNKYCKK 478
+NLNI F N+KN++ KIYIY N Y +K
Sbjct: 661 ENLNINSYFLNNVKNILPKIYIYINLYNEK 690
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 35.9 bits (79), Expect = 1.0
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +1
Query: 262 LGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXXN*YPLF 438
L F F+ GG G+I + +D T+H+T ++ HFH + + + +P
Sbjct: 331 LAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIAYDLWPHL 390
Query: 439 TGLSL 453
TG +L
Sbjct: 391 TGRAL 395
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 280 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 381
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 344 FILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 35.1 bits (77), Expect = 1.8
Identities = 21/57 (36%), Positives = 23/57 (40%)
Frame = +3
Query: 555 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQRINLFSLNLPSSIE*YQ 725
YSDYPD NQR+ LFSLN+PSSIE YQ
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQ 57
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 2.4
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +1
Query: 271 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 34.7 bits (76), Expect = 2.4
Identities = 29/63 (46%), Positives = 30/63 (47%)
Frame = +1
Query: 538 LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*LLFENQ*LTNELTYFL*ISHHQLN 717
LEYLDDI IIQ EI F H F Y LLFENQ EL Y + LN
Sbjct: 431 LEYLDDILIIQILTSLEISFHHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLN 490
Query: 718 DIK 726
D K
Sbjct: 491 DTK 493
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 2.4
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 277 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 3.1
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 271 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 34.3 bits (75), Expect = 3.1
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 669 NQRINLFSLNLPSSIE*YQ 725
NQRI LFSLN+PSSIE YQ
Sbjct: 451 NQRIILFSLNMPSSIEWYQ 469
>UniRef50_Q98PT0 Cluster: MALTODEXTRIN ABC TRANSPORTER PERMEASE
PROTEIN MALC; n=1; Mycoplasma pulmonis|Rep: MALTODEXTRIN
ABC TRANSPORTER PERMEASE PROTEIN MALC - Mycoplasma
pulmonis
Length = 1034
Score = 33.9 bits (74), Expect = 4.1
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 592 IFHEIYESG*SEYRRGIPAKPKKCCGKNLYLLQ*IL*KI-EFLVYKNLMKGL 440
+ H+IY+S E ++ IP + KK K +L+ IL + E L++K KG+
Sbjct: 570 LLHKIYQSKILEAQKSIPTENKKYASKKGFLINLILPGLAEILIFKQYWKGI 621
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 33.9 bits (74), Expect = 4.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 280 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 359 FVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 33.5 bits (73), Expect = 5.4
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 244 P*YL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
P Y+ L +F + G +GV A + ++ LH+T +VVAHFH
Sbjct: 360 PPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYLHNTLWVVAHFH 402
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 7.2
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 277 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 292 GLTGVILANSSIDITLHDTYYVVAHFHYVL 381
G+TG+ A S D +H+T +VV HFH ++
Sbjct: 359 GVTGISNATISFDAIVHNTDWVVGHFHAMI 388
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 9.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 280 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,368,983
Number of Sequences: 1657284
Number of extensions: 6149778
Number of successful extensions: 16059
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 15383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16037
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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