Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0681
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 173 1e-45
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 172 2e-45
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 172 2e-45
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 49 5e-08
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 2.8
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 2.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.8
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 2.8
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 6.4
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 6.4
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 173 bits (421), Expect = 1e-45
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = +2
Query: 2 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 181
FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 182 CKFAEIKEKVDRRTGKSTEVNPKS 253
CKFA+IKEK DRR GK+TE NPKS
Sbjct: 370 CKFADIKEKCDRRNGKTTEENPKS 393
Score = 97.1 bits (231), Expect = 1e-22
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +1
Query: 244 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 402
PK KSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGVIKAV F
Sbjct: 391 PKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGVIKAVTF 443
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 172 bits (419), Expect = 2e-45
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +2
Query: 2 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 181
FNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 310 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 369
Query: 182 CKFAEIKEKVDRRTGKSTEVNPKS 253
CKFAEIKEK DRRTGK+TE NPKS
Sbjct: 370 CKFAEIKEKCDRRTGKTTEENPKS 393
Score = 93.9 bits (223), Expect = 1e-21
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 244 PKIHKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNF 402
PK KSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGVIK+V F
Sbjct: 391 PKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGVIKSVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 172 bits (419), Expect = 2e-45
Identities = 78/84 (92%), Positives = 81/84 (96%)
Frame = +2
Query: 2 FNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 181
FNVKN+SVKELRRGYVAGDSKN PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA
Sbjct: 21 FNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIA 80
Query: 182 CKFAEIKEKVDRRTGKSTEVNPKS 253
CKFAEIKEK DRRTGK+TE NPKS
Sbjct: 81 CKFAEIKEKCDRRTGKTTEENPKS 104
Score = 27.1 bits (57), Expect = 0.17
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 244 PKIHKSGDAAIVNLVPSK 297
PK KSGDAAIV L P+K
Sbjct: 102 PKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 48.8 bits (111), Expect = 5e-08
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2
Query: 2 FNVKNVSVKELRRGYVAGDSKN 67
FNVKNVSVKELRRGYVAGDSKN
Sbjct: 253 FNVKNVSVKELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 512 NEYRSCMKNCAVNSSSYFLPLVAFS 438
+++ C+KN A SSYF+ + F+
Sbjct: 93 DKFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 512 NEYRSCMKNCAVNSSSYFLPLVAFS 438
+++ C+KN A SSYF+ + F+
Sbjct: 98 DKFYDCLKNSADTISSYFVGKMYFN 122
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 20 SVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 127
S ++LR ++A + + PKG Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 512 NEYRSCMKNCAVNSSSYFLPLVAFS 438
+++ C+KN A SSYF+ + F+
Sbjct: 98 DKFYDCLKNSADTISSYFVGKMYFN 122
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 139 RLHTSLGLPHCPHC 180
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 6.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 223 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 44
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 43 TTT 35
T T
Sbjct: 137 TVT 139
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.8 bits (44), Expect = 6.4
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -3
Query: 223 STTVNFFFDFCKFAGNVGSVAIQDWCVTV*DLTRMVKHNDLSCKICSTLRWVVFGVTSNI 44
ST+ N F K G G + CVT R HN + + C V + N+
Sbjct: 77 STSENKTFPTIKIVGYKGRALVVVSCVTKDQPYRPHPHNLVGKEACKQGVCTVEVSSENM 136
Query: 43 TTT 35
T T
Sbjct: 137 TVT 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,078
Number of Sequences: 438
Number of extensions: 4383
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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