Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0679
         (557 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   4.1  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   9.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/32 (25%), Positives = 21/32 (65%)
 Frame = -2

Query: 244 FENSNLNIKYIKKIERLKF*IINILQYLIYFK 149
           ++NSN+N   I  ++ + + +I I+  +++F+
Sbjct: 27  YKNSNVNYSKIGIVQTVAYFVIFIILTIVFFE 58


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -1

Query: 530 IFCQQEYNYIIFYMKTCLPKNKSYIKISFF 441
           I C ++YN I+ Y K      +  + + FF
Sbjct: 229 IECIEQYNVILRYTKIVSDTYQGILVVQFF 258


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 544 FHYNRYFVNK 515
           FHYNRY   +
Sbjct: 252 FHYNRYLTRR 261


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 544 FHYNRYFVNK 515
           FHYNRY   +
Sbjct: 252 FHYNRYLTRR 261


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -2

Query: 544 FHYNRYFVNK 515
           FHYNRY   +
Sbjct: 252 FHYNRYLTRR 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,089
Number of Sequences: 336
Number of extensions: 1944
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)