Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0677
         (743 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64604-1|AAF98623.1|  243|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z92829-14|CAB07342.2|  337|Caenorhabditis elegans Hypothetical p...    28   8.0  

>U64604-1|AAF98623.1|  243|Caenorhabditis elegans Hypothetical
           protein F49E7.2 protein.
          Length = 243

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +1

Query: 445 MLPKIDRCIIICNEYYS*IKINEYGIYVFLRFSLFLFTISH--EC*IIF 585
           ++  +  CI++  + +  +K+N YG++  L+   F+ T S   +C I++
Sbjct: 40  LIVNVQSCILLAKDNHGDMKVNGYGLHRELKLPAFIQTQSRIPQCRILY 88


>Z92829-14|CAB07342.2|  337|Caenorhabditis elegans Hypothetical
           protein F10A3.8 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = -2

Query: 145 YKTTCALYCA-YIRKASMSVEVFNIKYTTFFLNNFLVFIVI*ICSCY 8
           Y + C  +C  Y+  +  S  +FN+   T    N  V  +   CSCY
Sbjct: 56  YFSCCDFWCKPYVHMSKNSFAIFNVLEETKLTQNTGVIALELYCSCY 102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,456,360
Number of Sequences: 27780
Number of extensions: 269064
Number of successful extensions: 474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)