Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0677
         (743 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   4.0  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          22   5.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   5.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.0  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   9.2  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 104 FSNISTIQCTSCFI 145
           ++N+S +QCTS F+
Sbjct: 8   YNNVSPLQCTSPFL 21


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 572 HSCDIVNKNNEN 537
           +SCD++ K NEN
Sbjct: 10  NSCDLLKKRNEN 21


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 572 HSCDIVNKNNEN 537
           +SCD++ K NEN
Sbjct: 131 NSCDLLKKRNEN 142


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 188  FSTHDIIINDDETIV*NNL 132
            FST DI+   DE ++ NN+
Sbjct: 1418 FSTEDILDTADEDLLINNV 1436


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 389 DNSFLVNYIQKCLSYIIFLCKHY 321
           D+ F + +    LSY I L +HY
Sbjct: 221 DSKFGLGFTTDLLSYNILLRRHY 243


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,767
Number of Sequences: 438
Number of extensions: 3455
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)