Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0676
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0549 + 11410129-11412180                                         31   1.2  
08_01_0786 - 7606984-7607037,7607235-7607379,7608103-7608163,760...    30   2.2  
03_06_0341 - 33261210-33261327,33261411-33262057,33262950-332630...    29   2.9  
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438...    29   5.0  
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485...    28   8.8  

>02_02_0549 + 11410129-11412180
          Length = 683

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 23/71 (32%), Positives = 29/71 (40%)
 Frame = +3

Query: 198 DQHPLRDRGSLLENQERPGRQFTLAFGTANIFSGGTRVTTSSVHLHGSYNMNNLNNDVAI 377
           D   L   G +L    R      LA     +F+G   V ++S HL         N D   
Sbjct: 106 DTQDLGGHGVVLVVAPRANLTTGLANNYMGLFNGTGSVGSASNHLFAVELDTIQNPDFRD 165

Query: 378 INHNHVGFNNN 410
           IN+NHVG N N
Sbjct: 166 INNNHVGININ 176


>08_01_0786 -
           7606984-7607037,7607235-7607379,7608103-7608163,
           7608273-7608465
          Length = 150

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 186 PQMEVLPFVSAITSPARWG*APALAAEPPTILV 88
           P    LPF S + + AR G APAL+A P   LV
Sbjct: 11  PARSALPFRSRVAAAARPGRAPALSAAPGRRLV 43


>03_06_0341 -
           33261210-33261327,33261411-33262057,33262950-33263061,
           33263313-33264097,33264797-33264867,33266323-33266635
          Length = 681

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +2

Query: 401 QQQHPAHQPSQWKQQLCWYLGLGCRLREDLRCCFGSNNQQKRQVSLQVITNAVCAR 568
           QQQ P     Q +QQL    G   +L + L    G N Q  +Q+++    NA  A+
Sbjct: 566 QQQQPQQLQQQHQQQLAMSGGQNAQLAQQLAMSGGQNAQLAQQLAMSGGQNAQLAQ 621


>08_01_0505 -
           4379722-4380795,4380868-4381008,4381099-4381270,
           4381944-4382047,4382127-4382259,4384477-4384653,
           4385164-4385309,4385536-4385625,4385703-4385915,
           4386090-4386182,4386743-4386937,4387018-4387110,
           4387924-4388019,4388556-4388985,4389424-4390091,
           4392074-4392271,4392690-4393407,4394036-4394181
          Length = 1628

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -3

Query: 275 KSEGELTAWAFLVLQQ*AAVTERVLVSKELRRWKFCH 165
           ++EG L   A+L   + AAVTER L + + R+W   H
Sbjct: 515 ETEGVLVDRAYLSEIEKAAVTERELAADKFRKWASKH 551


>05_03_0235 -
           10747649-10748118,10748226-10748314,10748477-10748574,
           10748934-10749046,10749107-10749200,10749557-10749589,
           10749734-10749851,10750110-10750210,10751036-10751233,
           10751337-10751471,10751752-10751830,10753650-10753738,
           10753835-10753987,10754100-10754285
          Length = 651

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 134 GGEHQRWRQNHPQSW 90
           GG HQR R +HP +W
Sbjct: 559 GGHHQRRRHHHPPAW 573


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,349,960
Number of Sequences: 37544
Number of extensions: 326233
Number of successful extensions: 1195
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)