Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0675
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal prot... 137 1e-32
AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p pro... 137 1e-32
AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA... 137 1e-32
BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p pro... 35 0.075
AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p pro... 29 5.0
AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-P... 29 5.0
AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-P... 29 5.0
>X75339-1|CAA53089.1| 177|Drosophila melanogaster ribosomal protein
L18a protein.
Length = 177
Score = 137 bits (331), Expect = 1e-32
Identities = 64/87 (73%), Positives = 71/87 (81%)
Frame = +3
Query: 255 YESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVK 434
Y+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR VK
Sbjct: 84 YDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVK 143
Query: 435 QFHNSTIRFPLPKRVHHYKRLNTFATR 515
QFH+S I+FPL +RVHH F+ R
Sbjct: 144 QFHDSKIKFPLVQRVHHKGNRKLFSFR 170
Score = 128 bits (310), Expect = 4e-30
Identities = 60/83 (72%), Positives = 65/83 (78%)
Frame = +1
Query: 7 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 186
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 187 IVXXXXXXXXXXXXXXNFGIWLR 255
IV NFGIWLR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLR 83
>AY071222-1|AAL48844.1| 177|Drosophila melanogaster RE26382p
protein.
Length = 177
Score = 137 bits (331), Expect = 1e-32
Identities = 64/87 (73%), Positives = 71/87 (81%)
Frame = +3
Query: 255 YESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVK 434
Y+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR VK
Sbjct: 84 YDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVK 143
Query: 435 QFHNSTIRFPLPKRVHHYKRLNTFATR 515
QFH+S I+FPL +RVHH F+ R
Sbjct: 144 QFHDSKIKFPLVQRVHHKGNRKLFSFR 170
Score = 128 bits (310), Expect = 4e-30
Identities = 60/83 (72%), Positives = 65/83 (78%)
Frame = +1
Query: 7 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 186
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 187 IVXXXXXXXXXXXXXXNFGIWLR 255
IV NFGIWLR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLR 83
>AE013599-2503|AAF57838.1| 177|Drosophila melanogaster CG6510-PA
protein.
Length = 177
Score = 137 bits (331), Expect = 1e-32
Identities = 64/87 (73%), Positives = 71/87 (81%)
Frame = +3
Query: 255 YESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAACRRPQVK 434
Y+SRSG HNMYREYRDL+VGGAVTQCYRDMGARHRARAHSIQIIKV+ I AA RR VK
Sbjct: 84 YDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRRVHVK 143
Query: 435 QFHNSTIRFPLPKRVHHYKRLNTFATR 515
QFH+S I+FPL +RVHH F+ R
Sbjct: 144 QFHDSKIKFPLVQRVHHKGNRKLFSFR 170
Score = 128 bits (310), Expect = 4e-30
Identities = 60/83 (72%), Positives = 65/83 (78%)
Frame = +1
Query: 7 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 186
M+AKG L+EYEV+GRKLPSE EP+ PLYKMRIF+PD IVAKSRFWYFLRQLKKFKKTTGE
Sbjct: 1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGE 60
Query: 187 IVXXXXXXXXXXXXXXNFGIWLR 255
IV NFGIWLR
Sbjct: 61 IVSIKQVYETSPVKIKNFGIWLR 83
>BT023059-1|AAY55475.1| 328|Drosophila melanogaster IP10969p
protein.
Length = 328
Score = 35.1 bits (77), Expect = 0.075
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 7 MKAKGQLREYEVIGRKLP 60
M+AKG L+EYEV+GRKLP
Sbjct: 1 MRAKGLLKEYEVVGRKLP 18
>AY129442-1|AAM76184.1| 1124|Drosophila melanogaster LD16566p
protein.
Length = 1124
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 331 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 465
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
>AE014296-2184|AAF49884.1| 1087|Drosophila melanogaster CG10971-PB,
isoform B protein.
Length = 1087
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 331 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 465
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 8 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 52
>AE014296-2183|AAF49885.2| 1124|Drosophila melanogaster CG10971-PA,
isoform A protein.
Length = 1124
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +1
Query: 331 ATEIWELDTEPELIQYRLSKWK*SRLLRVAVHRSNSSTTAPSDSH 465
A W + + L+Q R + WK S LL + + S S SH
Sbjct: 45 AKTFWMIISRQPLMQSRFTAWKFSHLLHKVLREGHESAIRHSQSH 89
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,709,920
Number of Sequences: 53049
Number of extensions: 631869
Number of successful extensions: 1973
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1973
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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