Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0674
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    27   0.17 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.29 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   2.7  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 626 IKNLISIFISTRNRVNP*LFHEEYLVVHLHLC*TSSNWPLCFIH 495
           I +L+S  +  R+RVNP LF+  + V  LH   T +     FIH
Sbjct: 104 IDDLLSNAVFCRDRVNPYLFYYAFSVALLHRPDTQNLDLPSFIH 147


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +1

Query: 277 SMQIYHKVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVKIADKV 441
           ++QI +    PD+T     VD STK R   E +T   +  N        K++ KV
Sbjct: 437 NVQIENLKTTPDNTTFITLVDVSTKRRTELEDLTPTFDFTNGWANGTLAKLSPKV 491


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 53  NNRIQLSEERGWELLW 100
           N  ++L +E GW+++W
Sbjct: 300 NEIVELQKEGGWKVVW 315


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 59  RIQLSEERGWELLWLATGVFACSQVLMKELVEFLKTRPHPI 181
           +++  EE+  +++W   G F  SQV  +  + F   R H +
Sbjct: 273 QVRFFEEKNGKVVWEGFGDFQPSQVHKQTAICFKAPRYHTL 313


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 76  FTQLYSIVGQLLHYVTVY 23
           +T LYSIVG +  Y+ ++
Sbjct: 364 YTLLYSIVGAVTTYLVIF 381


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,288
Number of Sequences: 336
Number of extensions: 3799
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)