BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= mg--0674 (777 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 33 0.19 03_06_0135 + 31928838-31929698,31929783-31929932,31930795-319310... 30 1.8 03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 29 3.1 10_08_0585 - 18998013-18998306,18998448-18998630,18999048-189990... 29 4.1 08_01_0183 - 1537906-1539141 29 4.1 06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 29 4.1 >04_04_1509 - 34074206-34074398,34074506-34074777,34075411-34075608, 34076092-34076187,34076318-34076500,34076597-34076799, 34076887-34077013,34077098-34077292,34077400-34077540, 34077669-34077812,34077876-34078040,34078776-34078976, 34079049-34079195,34079275-34079427,34079731-34079833, 34079954-34080069,34080168-34080349,34080442-34080541, 34081200-34081527,34081605-34081834,34081979-34082110, 34082787-34082859,34083274-34083338 Length = 1248 Score = 33.5 bits (73), Expect = 0.19 Identities = 19/60 (31%), Positives = 28/60 (46%) Frame = +2 Query: 11 LRDEIYCHIMKQLTNNRIQLSEERGWELLWLATGVFACSQVLMKELVEFLKTRPHPIAKD 190 LRDE++ I KQ NN + R WEL++L S+ + L E++ H D Sbjct: 149 LRDELFAQISKQTRNNPDRAWLIRAWELMYLCASSMPPSKDIGAYLSEYVHYIAHGATTD 208 Score = 31.5 bits (68), Expect = 0.77 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 298 VYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLF 420 V+F D+T E D +T D E++ G + L FSLF Sbjct: 253 VFFLDETFEEITYDMATTVADAVEELAGIIKLSVYSSFSLF 293 >03_06_0135 + 31928838-31929698,31929783-31929932,31930795-31931065, 31931157-31931249,31931442-31931616,31931715-31931960, 31932100-31932294,31932604-31932802 Length = 729 Score = 30.3 bits (65), Expect = 1.8 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = -1 Query: 339 IHLESFISIVWEVYFV-IYLHTSMLNSFYPTTYGAYILDPYFCVLNNRFKQ--SLAIG*G 169 +H + I++E + +Y S YP +Y D F LNNR KQ S+ + Sbjct: 617 VHAPDTLPIIYERGLIGVYHDWCEPFSTYPRSYDLLHADHLFSRLNNRCKQPVSIVVEMD 676 Query: 168 RVLRNSTSSFIKTWLQAKTPV 106 R+LR + I+ L+ P+ Sbjct: 677 RILRPGGWAIIREKLEILDPL 697 >03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904, 33319949-33320011,33320103-33320496,33320684-33320796, 33320932-33321639,33321667-33323199,33323395-33323607, 33323718-33324700,33324890-33325423,33325694-33325820, 33326083-33326162,33327347-33327377,33327949-33328053, 33328119-33328124,33328349-33328985,33329144-33329478, 33330394-33331113 Length = 2792 Score = 29.5 bits (63), Expect = 3.1 Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Frame = +1 Query: 331 EVDSSTKARDLCEQITGRLNL---KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWM 501 E +SS K R C + NL + +D SLF++++ F + +F +F+H +V+ M Sbjct: 2370 ERESSCKRRFKCNCLLQGNNLYATQEADSHSLFLELSRLFFDGSPDLHFANFLH-MVKTM 2428 Query: 502 KQSGQFEE 525 SG E Sbjct: 2429 ADSGTTAE 2436 >10_08_0585 - 18998013-18998306,18998448-18998630,18999048-18999089, 18999226-18999495,18999903-19000454,19000546-19000770, 19001435-19001640,19001738-19001936,19002166-19002381, 19002887-19002991,19003127-19003243,19003366-19003548, 19004292-19004468,19004714-19004816,19005066-19005523 Length = 1109 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +1 Query: 307 PDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVKIADKV 441 PDD D V+S +CE +T + +S G S++ I DKV Sbjct: 666 PDDPDAEARVNSVRGLILVCETLTASVEHSSSFGDSMYSYIKDKV 710 >08_01_0183 - 1537906-1539141 Length = 411 Score = 29.1 bits (62), Expect = 4.1 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 158 GIQLVLSLKLGYRRRRQWPTKAAPILSLHSTVFY 57 G LVL L G RRR++ P P+ S VFY Sbjct: 207 GDVLVLRLPAGRRRRQRRPASFEPLFDKASAVFY 240 >06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017, 23824124-23824322,23824410-23824495,23824940-23825098, 23825204-23825302,23825385-23826578,23826666-23826734, 23828042-23828812 Length = 997 Score = 29.1 bits (62), Expect = 4.1 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 537 MQMNYQIFFMKKLWINTVPGRDKNADQIFYFPQELPKYLRGYHKTSK 677 M+M+ ++ + L NT+P A+ + P ELPK + G K SK Sbjct: 592 MKMDEDVYIFRPLRFNTLPVVKIAAEPLN--PSELPKMVEGLRKISK 636 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,496,787 Number of Sequences: 37544 Number of extensions: 378552 Number of successful extensions: 887 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 859 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 887 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2080154268 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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