Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0674
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 123 1e-28
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 0.23
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 33 0.23
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 33 0.23
AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family ... 33 0.23
AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family ... 33 0.23
AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family ... 33 0.23
AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family ... 33 0.23
AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family ... 33 0.23
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 31 0.70
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 31 0.70
AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family ... 31 0.70
AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family ... 31 0.70
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 31 0.92
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 31 0.92
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 31 0.92
Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z73899-3|CAA98075.1| 331|Caenorhabditis elegans Hypothetical pr... 29 2.8
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 29 2.8
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 29 4.9
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 29 4.9
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 29 4.9
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical pr... 28 6.5
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 123 bits (297), Expect = 1e-28
Identities = 54/82 (65%), Positives = 69/82 (84%)
Frame = +1
Query: 256 VEAIQHRSMQIYHKVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVKIAD 435
VEAIQH++ QI+HKV+FPD+TDEA EVDS+T+ARD C +I RL LK+SDGFSLFVKI D
Sbjct: 1768 VEAIQHKTTQIFHKVFFPDNTDEAIEVDSATRARDFCHKIGYRLGLKSSDGFSLFVKIKD 1827
Query: 436 KVFSVPENYYFFDFVHELVEWM 501
KV +VPE+ +FFD+V L +W+
Sbjct: 1828 KVLAVPESEFFFDYVRSLSDWV 1849
Score = 111 bits (268), Expect = 4e-25
Identities = 51/82 (62%), Positives = 62/82 (75%)
Frame = +2
Query: 8 ALRDEIYCHIMKQLTNNRIQLSEERGWELLWLATGVFACSQVLMKELVEFLKTRPHPIAK 187
ALRDE+YC ++KQLT N +SEERGWELLW+ATG+FA S L KE+ FLK+RPHPIA
Sbjct: 1685 ALRDELYCQLVKQLTLNPSIMSEERGWELLWMATGLFAPSAALAKEISHFLKSRPHPIAL 1744
Query: 188 DCLKRLFKTQKYGSRMYAPYVV 253
DC R+ K K GSR Y P++V
Sbjct: 1745 DCQNRMQKLAKGGSRKYPPHLV 1766
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +3
Query: 504 TKRPVRGGSTQMQMNYQIFFMKKLWINTVPGRDKNADQIFYFPQELPKYLRGYHKTSKQD 683
T + +T + +NYQ++FM+KLW N V G D AD IF++ QE KYL GYHKT+K D
Sbjct: 1851 TNHATQKDATMIPINYQVYFMRKLWYNFVAGADPQADIIFHYHQESQKYLLGYHKTTKND 1910
Query: 684 LVELAALVYRARFGSDPSL-LAQISHLL 764
++ELAAL+ R+ + LAQI LL
Sbjct: 1911 VIELAALILRSMTKDGKNAPLAQIPQLL 1938
Score = 59.7 bits (138), Expect = 2e-09
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Frame = +2
Query: 11 LRDEIYCHIMKQLTNNRIQLSEERGWELLWLATGVFACSQVLMKELVEFLKTRPHP---I 181
LRDEIYC + KQL+NN +LS RGW LL L G FA S+ +K L F++ R
Sbjct: 1079 LRDEIYCQLCKQLSNNPSKLSAARGWILLSLCVGCFAPSERFIKYLFCFIRERGPAGTGY 1138
Query: 182 AKDCLKRLFKTQKYGSRMYAPYVV 253
+K RL +TQ G+R P V
Sbjct: 1139 SKYIEDRLRRTQVNGTRHQPPSYV 1162
Score = 48.8 bits (111), Expect = 4e-06
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 298 VYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVKIADKVFSVPENY-YFFD 474
V F D + + DS+T A +LC+Q+ ++ L NS GFSL++ + DKV S+ + D
Sbjct: 1177 VTFMDGSVKTLCADSATTAAELCKQLAEKVGLTNSFGFSLYIALFDKVSSLGSGTDHVMD 1236
Query: 475 FVHELVEWMKQSGQFE 522
+ + ++ K+ G+ E
Sbjct: 1237 AISQCEQYAKEQGRQE 1252
>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
F46C3.3 protein.
Length = 2557
Score = 52.4 bits (120), Expect = 3e-07
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Frame = +2
Query: 2 EPALRDEIYCHIMKQLTNNRIQL--SEERGWELLWLATGVFACSQVLMKELVEFLK---- 163
+P LRDE+YC ++KQ T+N Q S R W LL + T F S L ++++L
Sbjct: 2137 QPTLRDEVYCQLIKQTTSNISQKPNSALRAWRLLTIITAYFPSSLTLKPYVLQYLGDNAD 2196
Query: 164 --TRP-HPIAKDCLKRLFKTQKYGSR 232
RP H A+ C + +T KYG R
Sbjct: 2197 EWQRPFHGTARICQTNMIQTFKYGGR 2222
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +2
Query: 5 PALRDEIYCHIMKQLTNNRIQLSEERGWELLWLATGVFACSQVLMKELVEFLKTRPHPIA 184
P RDEI + Q+ N+ + + + GW+L+ +A VF ++ ++ L+ F P+
Sbjct: 864 PCQRDEILVQTINQINKNQDKTASDNGWKLVHMAISVFPPTENIIPMLIGFFNKESVPMK 923
Query: 185 KDCLKRLFKTQK 220
+ L + K
Sbjct: 924 EQLFATLQRRLK 935
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AC006695-5|ABS83861.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform g protein.
Length = 1769
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AC006695-4|ABS83860.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform f protein.
Length = 1769
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AC006695-3|ABS83859.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform e protein.
Length = 1769
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AC006695-2|ABS83858.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform d protein.
Length = 1769
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>AC006695-1|ABS83857.1| 1769|Caenorhabditis elegans Titin family
protein 1, isoform c protein.
Length = 1769
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEE 525
L E+++G + K + F L VK+AD+V S F + VHE V+ + ++ EE
Sbjct: 1070 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVKKIVETEDEEE 1125
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 39 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 79
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 39 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 79
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSL 417
KV PD + FEV+ +++ L Q+T L+++ + FSL
Sbjct: 28 KVLLPDGVQKEFEVNKNSEGEALFRQVTRDLSIEEREYFSL 68
>AC006695-7|AAM48553.1| 724|Caenorhabditis elegans Titin family
protein 1, isoform a protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVE 495
L E+++G + K + F L VK+AD+V S F + VHE V+
Sbjct: 665 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVK 710
>AC006695-6|AAU45229.1| 703|Caenorhabditis elegans Titin family
protein 1, isoform b protein.
Length = 703
Score = 31.5 bits (68), Expect = 0.70
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 361 LCEQITGRLNL-KNSDGFSLFVKIADKVFSVPENYYFFDFVHELVE 495
L E+++G + K + F L VK+AD+V S F + VHE V+
Sbjct: 644 LKEEVSGTAQIEKREEEFKLLVKVADQVASTLVANVFLEAVHEAVK 689
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 382 RLNLKNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEEVQHK 537
+++LKN D ++ ++P N YF DF E + + +FE + K
Sbjct: 296 KVHLKNEDQLMPLIEFLQNTIAIPNNLYFDDFQFENGQLSMRISRFEGAKPK 347
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 382 RLNLKNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEEVQHK 537
+++LKN D ++ ++P N YF DF E + + +FE + K
Sbjct: 296 KVHLKNEDQLMPLIEFLQNTIAIPNNLYFDDFQFENGQLSMRISRFEGAKPK 347
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 382 RLNLKNSDGFSLFVKIADKVFSVPENYYFFDFVHELVEWMKQSGQFEEVQHK 537
+++LKN D ++ ++P N YF DF E + + +FE + K
Sbjct: 296 KVHLKNEDQLMPLIEFLQNTIAIPNNLYFDDFQFENGQLSMRISRFEGAKPK 347
>Z68493-5|CAA92800.1| 237|Caenorhabditis elegans Hypothetical
protein C33A12.7 protein.
Length = 237
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 379 GRLNLKNSDGFSLFVKIADKVFSVPENYYFF 471
GR + + + SLF + DK+F++PE+Y +
Sbjct: 148 GRTDFQQGNPASLFDSVHDKIFTLPEDYVVY 178
>Z73899-3|CAA98075.1| 331|Caenorhabditis elegans Hypothetical
protein ZK829.5 protein.
Length = 331
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/82 (23%), Positives = 38/82 (46%)
Frame = +2
Query: 125 SQVLMKELVEFLKTRPHPIAKDCLKRLFKTQKYGSRMYAPYVVG*KLFNIEVCRYITKYT 304
S++ K+ + + + KDC ++LF K+ R P + L+++E+C +
Sbjct: 28 SEITKKQWNQLIGIHEVVVYKDC-RKLFPAAKFSVRGLDPAL----LYSVEICFDVLSPF 82
Query: 305 SQTILMKLSRWIHLQKRGTCAS 370
+ + KL +WI + C S
Sbjct: 83 TFSYNKKLEKWIPTKTPVNCQS 104
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
Frame = -3
Query: 592 GTVLI--HSFFMKNI--W*F--ICICVEPPRTGRFVSSIQLIHEQSRRSNS 458
GTVL+ H ++NI W F I I V+PP G F + ++ Q+ RS+S
Sbjct: 434 GTVLLTPHPLAIENIRTWEFAPIVIFVQPPEFGEFKHTREVYRSQTTRSHS 484
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVK 426
+VY + +F+ D ST + + E I +L + FSL V+
Sbjct: 211 RVYLENGQTRSFKYDQSTTVKQILESILEKLQISAKSHFSLAVE 254
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVK 426
+VY + +F+ D ST + + E I +L + FSL V+
Sbjct: 211 RVYLENGQTRSFKYDQSTTVKQILESILEKLQISAKSHFSLAVE 254
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 295 KVYFPDDTDEAFEVDSSTKARDLCEQITGRLNLKNSDGFSLFVK 426
+VY + +F+ D ST + + E I +L + FSL V+
Sbjct: 250 RVYLENGQTRSFKYDQSTTVKQILESILEKLQISAKSHFSLAVE 293
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 600 LYQEPC*SIAFS*RIFGSSFAFVLNLLELAALFHPFN*FMN 478
+YQ + F +F ++F + LL +AA+FHP + F N
Sbjct: 302 IYQPVWNVVGFKHFVFAAAFQCEIALLYIAAIFHPRSIFPN 342
>U80840-2|AAK68305.1| 336|Caenorhabditis elegans Hypothetical
protein F08D12.7 protein.
Length = 336
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 150 TSSFIKTWLQAKTPVANQSSSHPLSSLNCILLL 52
T +F T L +PV++Q+S+ P S C+L++
Sbjct: 5 TLTFYLTLLYTLSPVSSQNSTEPCDSDKCLLMV 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,499,452
Number of Sequences: 27780
Number of extensions: 359886
Number of successful extensions: 1067
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -