Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0673
(646 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 60 4e-08
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 56 1e-06
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 55 1e-06
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 54 2e-06
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 54 3e-06
UniRef50_Q5DEI3 Cluster: SJCHGC09342 protein; n=1; Schistosoma j... 52 9e-06
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 2e-05
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 51 3e-05
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 50 4e-05
UniRef50_Q19Q42 Cluster: RNA helicase-like; n=1; Belgica antarct... 48 1e-04
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 48 3e-04
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 48 3e-04
UniRef50_UPI00003C10F5 Cluster: hypothetical protein UM00313.1; ... 47 4e-04
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 46 8e-04
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 45 0.002
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 44 0.002
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 44 0.004
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 42 0.013
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 42 0.013
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 42 0.017
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 42 0.017
UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain, p... 41 0.022
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 41 0.022
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 41 0.022
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 40 0.039
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 40 0.051
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 39 0.090
UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1; S... 39 0.090
UniRef50_Q4DDJ0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 39 0.12
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 38 0.16
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 38 0.16
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 38 0.21
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 38 0.27
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 37 0.36
UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium... 37 0.36
UniRef50_Q4Q1G8 Cluster: DEAD/DEAH box helicase, putative; n=3; ... 37 0.36
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 37 0.36
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 37 0.36
UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genom... 37 0.48
UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1; Ostre... 36 0.63
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 36 0.63
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 36 0.84
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 36 0.84
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 36 1.1
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 36 1.1
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 35 1.5
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 35 1.5
UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, wh... 35 1.5
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 34 2.6
UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 34 3.4
UniRef50_Q4KMF6 Cluster: Zgc:111815; n=3; Danio rerio|Rep: Zgc:1... 34 3.4
UniRef50_Q0UIP9 Cluster: Putative uncharacterized protein; n=3; ... 33 5.9
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 33 7.8
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 60.1 bits (139), Expect = 4e-08
Identities = 25/43 (58%), Positives = 34/43 (79%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTSY FFTP+N +A DL+ VL+EANQ ++P+L+ A
Sbjct: 440 GRSTNKGTSYTFFTPANGAKAGDLIGVLREANQFVNPELEQYA 482
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 60.1 bits (139), Expect = 4e-08
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 622 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS + GT+Y FT SN+ +A DL++VL+EANQ+I+P+L MA
Sbjct: 461 GRSNNTGTAYTLFTNSNANKAGDLINVLREANQVINPKLAEMA 503
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 55.2 bits (127), Expect = 1e-06
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS + GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 496 GRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 639
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/42 (52%), Positives = 33/42 (78%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GRS + GT+Y FFTP N+ +A++L+ VL+EA Q+I+P+L M
Sbjct: 426 GRSNNTGTAYTFFTPDNAGRARELIDVLKEAKQVINPKLLDM 467
>UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5;
Eukaryota|Rep: Ethylene-responsive RNA helicase -
Solanum lycopersicum (Tomato) (Lycopersicon esculentum)
Length = 474
Score = 54.0 bits (124), Expect = 3e-06
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ + GT+Y FFT +N+R AKDLV++L+EA Q +SP+L M
Sbjct: 406 GRAGASGTAYTFFTAANARFAKDLVNILEEAGQKVSPELAKM 447
>UniRef50_Q5DEI3 Cluster: SJCHGC09342 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09342 protein - Schistosoma
japonicum (Blood fluke)
Length = 224
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = +2
Query: 5 RSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
RS +GT++ FFT N+RQA+DL+ +L EANQ I+P+L +A
Sbjct: 43 RSDKRGTAFTFFTYKNARQARDLIEILDEANQEITPELIQLA 84
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR S GT+Y FFTP N RQA++L+SVL+EA Q + QL +A
Sbjct: 570 GRCSSYGTAYTFFTPGNGRQARELLSVLEEAGQQPTAQLIDLA 612
>UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;
n=11; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
30 - Oryza sativa subsp. japonica (Rice)
Length = 666
Score = 50.8 bits (116), Expect = 3e-05
Identities = 20/43 (46%), Positives = 35/43 (81%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ + GT++ FFT SN++ +++LV +L+EA Q+++P L+SMA
Sbjct: 588 GRAGASGTAFTFFTLSNAKFSRNLVKILREAGQVVNPALESMA 630
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ KG+SY F TP + A++LV +++EANQ I P+LQ +A+
Sbjct: 548 GRAGMKGSSYTFLTPDKFKSARELVKLMREANQEIPPELQKLAN 591
>UniRef50_Q19Q42 Cluster: RNA helicase-like; n=1; Belgica
antarctica|Rep: RNA helicase-like - Belgica antarctica
Length = 105
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 8 SKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
S +KGTSY FFT N+ + +LV++LQE NQ ++P+L +M
Sbjct: 1 SGNKGTSYTFFTEENAGKVDELVNILQETNQYVNPELLTM 40
>UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/36 (52%), Positives = 30/36 (83%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIIS 109
GR+ +KGT+Y FFT +N+R AKDL+++L+EA Q ++
Sbjct: 404 GRAGAKGTAYTFFTAANARFAKDLINILEEAGQKVT 439
>UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase DBP2
- Gibberella zeae (Fusarium graminearum)
Length = 555
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/42 (52%), Positives = 29/42 (69%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ + GT+ FT N +QA+DLV+VLQEA Q I P+L M
Sbjct: 473 GRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEM 514
>UniRef50_UPI00003C10F5 Cluster: hypothetical protein UM00313.1;
n=1; Ustilago maydis 521|Rep: hypothetical protein
UM00313.1 - Ustilago maydis 521
Length = 136
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ GT+Y +FTP NS+ A++L+ +L+EA Q I +++ M
Sbjct: 52 GRAGRTGTAYTYFTPENSKSARELIGILREAKQEIPREIEEM 93
>UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2;
Magnoliophyta|Rep: Isoform 2 of Q5VQL1 - Oryza sativa
subsp. japonica (Rice)
Length = 759
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ + G +Y FF +S+ A DLV +L+ ANQ +S QL+ M R
Sbjct: 567 GRAGATGVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDMVSR 611
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ + G +Y FF +++ A DL+ +L+ ANQ + PQ++ MA R
Sbjct: 497 GRAGATGLAYTFFGDQDAKHASDLIKILEGANQKVPPQVREMATR 541
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQL 118
GR+ + G S +FFTP R A DL+ VL+EA Q I P+L
Sbjct: 329 GRAGATGVSLSFFTPDKYRMASDLIKVLKEAKQRIPPEL 367
>UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila
melanogaster|Rep: LD33749p - Drosophila melanogaster
(Fruit fly)
Length = 703
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ +GTS +FFT + AK+L+ +LQEA Q + +L +MA R
Sbjct: 621 GRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARR 665
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 41.9 bits (94), Expect = 0.013
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ + GTSY F TP ++ D++ ++ +NQ++ +LQ +A+
Sbjct: 727 GRAGNIGTSYTFITPEEGAKSHDIIKAMKASNQVVPIELQELAE 770
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ + G ++ FFT + + A DL+ VL+ ANQ + PQ++ +A R
Sbjct: 771 GRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAMR 815
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 41.5 bits (93), Expect = 0.017
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQL 118
GR+ KG ++ FFT N A +LV+VL+EA Q++ P L
Sbjct: 474 GRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPAL 512
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ G + +FF N DL+ +L E NQ+ISP+++++A R
Sbjct: 504 GRAGKVGVAISFFNEKNRNIVDDLIPLLNETNQVISPEVRALAKR 548
>UniRef50_Q7RNB9 Cluster: Helicase conserved C-terminal domain,
putative; n=4; Plasmodium (Vinckeia)|Rep: Helicase
conserved C-terminal domain, putative - Plasmodium
yoelii yoelii
Length = 212
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ + G S+ F T R AK+LV +L+E+ Q I PQL+ ++
Sbjct: 124 GRAGAHGASFTFLTSDKYRLAKELVKILRESEQPIPPQLEKIS 166
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQL 118
GR+ KG ++ FFTP N A +LV+VL+EA Q++ L
Sbjct: 458 GRAGKKGVAHTFFTPLNKGLAGELVNVLREAGQVVPADL 496
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 41.1 bits (92), Expect = 0.022
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ + G +Y FF +S+ A DL+ +L+ ANQ + L MA R
Sbjct: 486 GRAGATGVAYTFFCDQDSKYAADLIKILEGANQRVPRDLADMASR 530
>UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Ustilago maydis|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Ustilago maydis (Smut fungus)
Length = 1156
Score = 40.3 bits (90), Expect = 0.039
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ KGT F TP R A+D+++ L+ + + P+L++MA
Sbjct: 819 GRAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPELEAMA 861
>UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=7;
Bilateria|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 741
Score = 39.9 bits (89), Expect = 0.051
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ G S +FFT + A DL+ +L+EA+Q + +++ MA+R
Sbjct: 661 GRAGRSGVSLSFFTRGDWAVASDLIKILEEADQEVPEEIRQMAER 705
>UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;
Coelomata|Rep: ATP-dependent RNA helicase DDX42 - Homo
sapiens (Human)
Length = 938
Score = 39.1 bits (87), Expect = 0.090
Identities = 19/43 (44%), Positives = 26/43 (60%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ KG +Y TP +S A DLV L+ ANQ +S +L +A
Sbjct: 590 GRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLA 632
>UniRef50_Q10202 Cluster: ATP-dependent RNA helicase dbp3; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp3 - Schizosaccharomyces pombe (Fission
yeast)
Length = 578
Score = 39.1 bits (87), Expect = 0.090
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQII 106
GR+ +KGT+ FFTP + A +LV+VL++A Q I
Sbjct: 508 GRANTKGTAITFFTPQDKSHAGELVNVLRQAKQDI 542
>UniRef50_Q4DDJ0 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma cruzi
Length = 642
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR G Y FF P + + AK LV+ L++ Q+I P+LQ A++
Sbjct: 546 GRHGVSGYCYTFFQPESVKLAKPLVAHLRQTQQLIPPKLQEYANQ 590
>UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-PA
- Drosophila melanogaster (Fruit fly)
Length = 1224
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 849 GRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 777
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 2 GRSKSKGTSYAFFT--PSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR +KG + FT P N+ A+ L+ +L+E Q ISP L +AD
Sbjct: 675 GRQGNKGHALTLFTDTPQNTPMARGLIKILEECKQQISPDLIKLAD 720
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 38.3 bits (85), Expect = 0.16
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR + G + +F+ N+ A DLV +L+EANQI+ L ++AD
Sbjct: 528 GRLGNHGRATSFYVDKNNNIAIDLVDLLKEANQIVPQWLSALAD 571
>UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 723
Score = 37.9 bits (84), Expect = 0.21
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ KGT+ F + + A DLV L+E+ Q + +Q+MAD
Sbjct: 431 GRAGQKGTAVTFISEDEEKFAPDLVKALKESKQNVPQDVQAMAD 474
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 37.5 bits (83), Expect = 0.27
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ + G + AFF +N+ AK L ++QEANQ + L A R
Sbjct: 497 GRAGNSGLATAFFNDNNTTMAKPLAELMQEANQEVPDWLTRYASR 541
>UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 757
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ G + AFF N AK LV ++QE+NQ + L A+R
Sbjct: 624 GRAGKSGLATAFFNDGNLSLAKSLVELMQESNQEVPSWLNQYAER 668
>UniRef50_Q6BG49 Cluster: RNA helicase, putative; n=1; Paramecium
tetraurelia|Rep: RNA helicase, putative - Paramecium
tetraurelia
Length = 1157
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 121
GR+ KGT+ FFTP + A DLV +L+++ Q + +L+
Sbjct: 843 GRAGQKGTAITFFTPQDEHLANDLVYLLEKSEQQLPEKLK 882
>UniRef50_Q4Q1G8 Cluster: DEAD/DEAH box helicase, putative; n=3;
Leishmania|Rep: DEAD/DEAH box helicase, putative -
Leishmania major
Length = 702
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
G + +G Y FF P N + AK LV L++ Q++ P+L+ A
Sbjct: 606 GSLQGRGYIYTFFQPENIKLAKPLVGYLRQHQQLVPPRLREYA 648
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 37.1 bits (82), Expect = 0.36
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQ 121
GR + G + +F+T N+ AK+LV +L EANQI+ L+
Sbjct: 558 GRVGNLGEAISFYTDKNNNVAKELVDILLEANQIVPDWLR 597
>UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX43;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX43 - Homo sapiens (Human)
Length = 648
Score = 37.1 bits (82), Expect = 0.36
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ G S T ++ R A +L+++L+ ANQ I +L SMA+R
Sbjct: 579 GRAGRTGVSITTLTRNDWRVASELINILERANQSIPEELVSMAER 623
>UniRef50_A7P8T9 Cluster: Chromosome chr3 scaffold_8, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr3 scaffold_8, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 971
Score = 36.7 bits (81), Expect = 0.48
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ KG++ F + ++R A DLV L+ + Q++ L+++AD
Sbjct: 683 GRAGRKGSAITFISDDDARYAPDLVKALELSEQVVPDDLKALAD 726
>UniRef50_Q00T47 Cluster: Putative RNA helicase, DRH1; n=1;
Ostreococcus tauri|Rep: Putative RNA helicase, DRH1 -
Ostreococcus tauri
Length = 1118
Score = 36.3 bits (80), Expect = 0.63
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ G ++ FFT N A +L+ +LQ A Q + LQ+M
Sbjct: 445 GRAGKDGKAFTFFTKDNRGAANELIEILQGAGQTVPLALQAM 486
>UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 518
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ KG +Y T S+ A DLV L+ ANQ++ L ++A
Sbjct: 443 GRAGEKGNAYTLLTQSDQNFAGDLVRNLEIANQVVPESLMALA 485
>UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Filobasidiella neoformans|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 1072
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ +KGT F TP R + D+V L+ + I L+ M+D
Sbjct: 748 GRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDLKKMSD 791
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 35.9 bits (79), Expect = 0.84
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
G +K +G S+ FFT + A++L+ +L+EANQ + L+ M
Sbjct: 425 GNTK-EGISHTFFTVGDKANARELIRMLREANQTVPSDLEDM 465
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADRC 139
GR+ G S T ++ + A +L+ +L+ ANQ + L MA++C
Sbjct: 642 GRAGKTGVSVTLMTQADWKIATELIKILERANQSVPEDLLKMAEQC 687
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/44 (27%), Positives = 26/44 (59%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ ++GT+Y F TP R + ++ L+++ + +L+ + D
Sbjct: 848 GRAGNRGTAYTFITPDEERFSSSIIKALEQSGSKVPDELRKLND 891
>UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1;
Ostreococcus tauri|Rep: DEAD-box protein abstrakt -
Ostreococcus tauri
Length = 1030
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ KGT+ F + + A DLV L+++ Q + +Q +AD
Sbjct: 669 GRAGQKGTAVTFISEDEEKFAPDLVKALKDSKQTVPRDVQRLAD 712
>UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4;
Eukaryota|Rep: RNA helicase, putative - Theileria
annulata
Length = 976
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ + GTSY F TP + ++ D++ L+ A+Q + +L ++
Sbjct: 707 GRAGTIGTSYTFLTPEEASKSHDIIKALKLASQEVPKELLQLS 749
>UniRef50_A0D361 Cluster: Chromosome undetermined scaffold_36, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_36,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 813
Score = 35.1 bits (77), Expect = 1.5
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPS--NSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ KG + + P+ N+R DLV VLQ+++Q+I +L S+
Sbjct: 768 GRAGKKGQAISLLEPAFFNNRLKNDLVQVLQQSDQVIPQELSSL 811
>UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helicase
DDX43 (EC 3.6.1.-) (DEAD box protein 43) (DEAD box
protein HAGE) (Helical antigen).; n=1; Bos taurus|Rep:
Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)
(DEAD box protein 43) (DEAD box protein HAGE) (Helical
antigen). - Bos Taurus
Length = 597
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ G S T ++ + A +L+++L+ ANQ + L SMA+R
Sbjct: 528 GRAGRTGVSITLITRNDWKIAGELINILERANQSVPEDLVSMAER 572
>UniRef50_A2EL80 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1851
Score = 34.3 bits (75), Expect = 2.6
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 580 RLNALNINKILH--EFDDIYSTWKISSKNALFCKSWVES 470
++NA+N NK+ + E DD ++I LFCKSW E+
Sbjct: 1711 KINAINANKLHYVVEEDDEPDEYRIRYNGVLFCKSWPEN 1749
>UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 535
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GRS +G + + FT +++R AKDL+SVL+ A+Q + +L +M
Sbjct: 493 GRSV-EGEAISLFTYADARLAKDLISVLKGAHQEVPSELLNM 533
>UniRef50_Q4KMF6 Cluster: Zgc:111815; n=3; Danio rerio|Rep:
Zgc:111815 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 438
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR+ KG +Y T ++ A DLV L+ ANQ +S L +A
Sbjct: 158 GRAGEKGVAYTLLTTKDTSFAGDLVRNLEGANQSVSKDLLDLA 200
>UniRef50_Q0UIP9 Cluster: Putative uncharacterized protein; n=3;
Dikarya|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 72
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 47 SNSRQAKDLVSVLQEANQIISPQLQSMA 130
++S+QA+DLV +L E+ Q I P+L MA
Sbjct: 3 ADSKQARDLVQILTESKQQIDPRLHEMA 30
>UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 1357
Score = 32.7 bits (71), Expect = 7.8
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 133
GR+ +KGT+ F P + + DL+ L+ ++Q + +L M +
Sbjct: 1047 GRAGNKGTAVTFIGPEEDKYSLDLIKALKRSDQKVPEELLRMGE 1090
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,316,024
Number of Sequences: 1657284
Number of extensions: 9988128
Number of successful extensions: 18913
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 18426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18908
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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