Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0673
(646 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52846-1|CAA37037.1| 575|Drosophila melanogaster protein ( Dros... 60 3e-09
BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p pro... 60 3e-09
BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p pro... 60 3e-09
BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p pro... 60 3e-09
AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF... 60 3e-09
AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC... 60 3e-09
AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB... 60 3e-09
AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE... 60 3e-09
AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD... 60 3e-09
AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA... 60 3e-09
AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p pro... 55 7e-08
AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-P... 55 7e-08
AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p pro... 50 2e-06
AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-P... 50 2e-06
AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p pro... 44 2e-04
BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p pro... 38 0.009
AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p pro... 38 0.009
AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA... 38 0.009
>X52846-1|CAA37037.1| 575|Drosophila melanogaster protein (
Drosophila melanogasterRM62 mRNA for novel RNA helicase.
).
Length = 575
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 478 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT015209-1|AAT94438.1| 575|Drosophila melanogaster RE56857p
protein.
Length = 575
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 478 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>BT011476-1|AAR99134.1| 719|Drosophila melanogaster RE11923p
protein.
Length = 719
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 622 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>BT001716-1|AAN71471.1| 578|Drosophila melanogaster RE68337p
protein.
Length = 578
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 481 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-394|AAG22212.1| 578|Drosophila melanogaster CG10279-PF,
isoform F protein.
Length = 578
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 481 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-393|AAN14332.1| 578|Drosophila melanogaster CG10279-PC,
isoform C protein.
Length = 578
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 481 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-392|AAF51926.2| 578|Drosophila melanogaster CG10279-PB,
isoform B protein.
Length = 578
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 481 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-391|AAF51927.2| 578|Drosophila melanogaster CG10279-PE,
isoform E protein.
Length = 578
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 481 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 523
>AE014297-390|AAN14331.1| 575|Drosophila melanogaster CG10279-PD,
isoform D protein.
Length = 575
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 478 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 520
>AE014297-389|AAG22213.2| 719|Drosophila melanogaster CG10279-PA,
isoform A protein.
Length = 719
Score = 60.1 bits (139), Expect = 3e-09
Identities = 27/43 (62%), Positives = 37/43 (86%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS +KGTS+AFFT +N++QAK LV VL+EANQ I+P L+++A
Sbjct: 622 GRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLA 664
>AY102660-1|AAM27489.1| 818|Drosophila melanogaster GH10652p
protein.
Length = 818
Score = 55.2 bits (127), Expect = 7e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS + GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 496 GRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AE014296-1163|AAF50635.2| 818|Drosophila melanogaster CG10077-PA,
isoform A protein.
Length = 818
Score = 55.2 bits (127), Expect = 7e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GRS + GT+Y FT SN+ +A DL+ VL+EANQ I+P+L +MA
Sbjct: 496 GRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINPKLMNMA 538
>AY060404-1|AAL25443.1| 945|Drosophila melanogaster LD32873p
protein.
Length = 945
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR + GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 583 GRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AE014298-1087|AAF46295.1| 945|Drosophila melanogaster CG10777-PB
protein.
Length = 945
Score = 50.4 bits (115), Expect = 2e-06
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
GR + GT+Y FFTP N++QA++L+SVL+EA Q S L +A
Sbjct: 583 GRCQQLGTAYTFFTPDNAKQARELISVLEEAGQTPSQALLDLA 625
>AY051831-1|AAK93255.1| 703|Drosophila melanogaster LD33749p
protein.
Length = 703
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
GR+ +GTS +FFT + AK+L+ +LQEA Q + +L +MA R
Sbjct: 621 GRAGRQGTSISFFTREDWAMAKELIEILQEAEQEVPDELHNMARR 665
>BT016090-1|AAV36975.1| 1224|Drosophila melanogaster LD41277p
protein.
Length = 1224
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 849 GRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
>AY058515-1|AAL13744.1| 680|Drosophila melanogaster LD21880p
protein.
Length = 680
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 305 GRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 346
>AE014298-2134|AAF48446.1| 1224|Drosophila melanogaster CG6227-PA
protein.
Length = 1224
Score = 38.3 bits (85), Expect = 0.009
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 2 GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSM 127
GR+ KG++Y F TP SR A D++ + + +I +LQ++
Sbjct: 849 GRAGKKGSAYTFITPEQSRYAGDIIRAMDLSGTLIPAELQAL 890
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,109,112
Number of Sequences: 53049
Number of extensions: 464478
Number of successful extensions: 851
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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