Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0673
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    53   2e-07
AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical...    30   1.2  
Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical ...    28   4.9  

>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 24/45 (53%), Positives = 32/45 (71%)
 Frame = +2

Query: 2   GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMADR 136
           GRS  KGT+Y FFT +N+ +AKDL+ VL EA Q +   L+ MA+R
Sbjct: 468 GRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTVPQALRDMANR 512


>AC024859-14|AAY43989.1|  643|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.19 protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +2

Query: 2   GRSKSKGTSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMA 130
           GR  + G + +FF   N   A++L+ ++ EANQ +   L+ M+
Sbjct: 519 GRVGNVGLATSFFNDKNRNIARELMDLIVEANQELPDWLEGMS 561


>Z68879-1|CAA93081.1|  850|Caenorhabditis elegans Hypothetical
           protein K08F4.1 protein.
          Length = 850

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 24  HHMLSLPLQIPVKPKIWYLFYKKLIRLLAHNCSRW 128
           +++++LP+ +  K   W+LFY   I+ + H+   W
Sbjct: 580 NYLVTLPIGVIRKASTWFLFYDD-IQKIVHSLQNW 613


>AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical
           protein Y57A10C.11 protein.
          Length = 262

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +3

Query: 435 LYYVKTVIFFYCDSTQDLQNSAFLLEIFQVE*MSSNSCRILLIFRALSRHSTLVTFHCII 614
           L  + T+IFF C  T  +  S      FQ E ++       L+F  L    TL T H  I
Sbjct: 154 LQMIYTIIFFVCSQTYYISLSCMTYYPFQQEKIAIKFWSPTLLFCPLINIFTLPTIHLAI 213


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,318,207
Number of Sequences: 27780
Number of extensions: 253005
Number of successful extensions: 460
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)