Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0672
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    36   0.57 
UniRef50_Q0U754 Cluster: Predicted protein; n=1; Phaeosphaeria n...    35   1.3  
UniRef50_Q72A96 Cluster: Putative uncharacterized protein; n=2; ...    33   3.0  
UniRef50_Q025C2 Cluster: Putative uncharacterized protein precur...    32   7.0  
UniRef50_Q7QT12 Cluster: GLP_675_30832_29519; n=1; Giardia lambl...    32   7.0  
UniRef50_A3LX49 Cluster: Anaphase-promoting complex (APC), subun...    32   9.3  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 35.9 bits (79), Expect = 0.57
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +3

Query: 207 GITVRFDQAYSRRTRFTFAAFDITNAAGRGLNYRVEIWGR 326
           G T R  + Y  R   T     + +A GRG +YR+EIWGR
Sbjct: 128 GATARVVEGYLGRNSITI---QLQSARGRGFHYRIEIWGR 164


>UniRef50_Q0U754 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 471

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +2

Query: 152 LCLRLPVLASTPYALEKLGHHSPVRSGLLTADSVH 256
           LC+ LP  +STP  L+  GH  P+ S +L   SVH
Sbjct: 324 LCVELPSPSSTPTFLDPTGHEVPIWSTILQYKSVH 358


>UniRef50_Q72A96 Cluster: Putative uncharacterized protein; n=2;
            Desulfovibrio vulgaris subsp. vulgaris|Rep: Putative
            uncharacterized protein - Desulfovibrio vulgaris (strain
            Hildenborough / ATCC 29579 / NCIMB8303)
          Length = 1783

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -2

Query: 212  DAPTSLARMALMRVPVGANKVNG*AHDDTIEARTKFSLR 96
            D P SLAR+ +  VPV A +V+G A   T+E RT+ + R
Sbjct: 1137 DVPVSLARLVVDTVPV-AGEVSGEARVSTVEGRTEGAFR 1174


>UniRef50_Q025C2 Cluster: Putative uncharacterized protein
           precursor; n=1; Solibacter usitatus Ellin6076|Rep:
           Putative uncharacterized protein precursor - Solibacter
           usitatus (strain Ellin6076)
          Length = 278

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +1

Query: 19  VEKEDFDSFRRSTLNLGVIGNQDRLLRSENFVRASMVSSWAHPLTLFAPTGTRINAIRAR 198
           V K D  +FRR  +N   I  +  L   ENF + + V     PL    P GT   A    
Sbjct: 98  VNKSDPSAFRRPMMNYRSIAGRLSLQFGENFAKFASVKGDTVPLAFGRPIGTAATAPGLT 157

Query: 199 EVG 207
            +G
Sbjct: 158 RIG 160


>UniRef50_Q7QT12 Cluster: GLP_675_30832_29519; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_675_30832_29519 - Giardia lamblia
           ATCC 50803
          Length = 437

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 386 NCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAGCVRNVKSGKGEPSP 243
           +C   LR   + +   I  L SPN+HP + +P     +  SG G P+P
Sbjct: 45  DCEATLRETNFDFDKAIDLLISPNYHPWISNPINKSLHRPSGHGGPNP 92


>UniRef50_A3LX49 Cluster: Anaphase-promoting complex (APC), subunit
           1; n=1; Pichia stipitis|Rep: Anaphase-promoting complex
           (APC), subunit 1 - Pichia stipitis (Yeast)
          Length = 1549

 Score = 31.9 bits (69), Expect = 9.3
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 371 LRPKCYCYFLYIVFLTSPNFHPVVQSPAGCVRNVKSGKGEPSPP*VSLI 225
           + P+ +C       L SPNF P       C   +  G+ E  PP +S++
Sbjct: 643 ITPRTHCILKLFEILVSPNFGPTAVVDMMCEYGITRGELETYPPGISIL 691


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,496,396
Number of Sequences: 1657284
Number of extensions: 9836724
Number of successful extensions: 19456
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19451
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)