Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0672
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   0.94 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   0.94 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   2.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.8  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 305 VVQSPAGCVRNVKSGKGEPSPP*VSLIEP 219
           V+ SP G V N+   K EP+P   S+I+P
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNP---SIIDP 160


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 305 VVQSPAGCVRNVKSGKGEPSPP*VSLIEP 219
           V+ SP G V N+   K EP+P   S+I+P
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNP---SIIDP 160


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 323 SPNFHPVVQSPAGCVRNVKSGKGEPSPP 240
           +P   P+VQ P     +  SG    SPP
Sbjct: 93  APLASPLVQEPGSSTTSATSGAVMASPP 120


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 80  FPITPRFKVDLLKESKSSFS 21
           FP+T   KV  LKE + +FS
Sbjct: 234 FPLTKAEKVRNLKEDEVTFS 253


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 80  FPITPRFKVDLLKESKSSFS 21
           FP+T   KV  LKE + +FS
Sbjct: 190 FPLTKAEKVRNLKEDEVTFS 209


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 434 LCIY*YFLARCYYQIEHFKFLCIIKY 511
           LCIY ++ A   + +     LCI  +
Sbjct: 144 LCIYYFYCAFIIFTVHLLFLLCIYHF 169


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,661
Number of Sequences: 336
Number of extensions: 2564
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)