Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0672
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41109-9|AAB37039.1|  239|Caenorhabditis elegans Hypothetical pr...    31   0.67 
U42844-9|AAB53821.1|  315|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U58735-2|AAC48147.3|  443|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AF364401-1|AAK73018.1|  443|Caenorhabditis elegans ceramide gluc...    28   4.7  
Z93395-5|CAE18034.1|  519|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z83112-6|CAE17883.1|  519|Caenorhabditis elegans Hypothetical pr...    27   6.2  
Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical pr...    27   8.2  
Z49068-6|CAA88857.1|  239|Caenorhabditis elegans Hypothetical pr...    27   8.2  
X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.       27   8.2  
X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.       27   8.2  
AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U41109-9|AAB37039.1|  239|Caenorhabditis elegans Hypothetical
           protein F52E1.3 protein.
          Length = 239

 Score = 30.7 bits (66), Expect = 0.67
 Identities = 26/75 (34%), Positives = 38/75 (50%)
 Frame = -2

Query: 374 ELRPKCYCYFLYIVFLTSPNFHPVVQSPAGCVRNVKSGKGEPSPP*VSLIEPDCDAPTSL 195
           +LRPK    F+Y +FLT+PN H V  S      N++SG     P   +  +   ++P  L
Sbjct: 158 KLRPKRGS-FIYNIFLTNPN-HTVSTSD-DSNPNIESGATSVGPTPRTTAQAK-ESPQEL 213

Query: 194 ARMALMRVPVGANKV 150
               L + PVG +KV
Sbjct: 214 NPSDLNKPPVGKSKV 228


>U42844-9|AAB53821.1|  315|Caenorhabditis elegans Hypothetical
           protein C08A9.9 protein.
          Length = 315

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 302 VQSPAGCVRNVKSGKGEPSPP 240
           VQSP  C++NVK  +   SPP
Sbjct: 178 VQSPRSCIQNVKPQQSASSPP 198


>U58735-2|AAC48147.3|  443|Caenorhabditis elegans Hypothetical
           protein F20B4.6 protein.
          Length = 443

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 359 CYCYFLY-IVFLTSPNFHPVVQSPAGCVRNVKSGKGEPSPP*VSLIEPDCDAPTSL 195
           C C+ ++ +VF+++  F  +V    G  R  +  K  PS P VS+I+P   A  +L
Sbjct: 58  CTCFAVFGVVFVSALYFLHIVGLCYGKYRLHRPTKPNPSLPGVSIIKPIIGADANL 113


>AF364401-1|AAK73018.1|  443|Caenorhabditis elegans ceramide
           glucosyltransferase protein.
          Length = 443

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = -2

Query: 359 CYCYFLY-IVFLTSPNFHPVVQSPAGCVRNVKSGKGEPSPP*VSLIEPDCDAPTSL 195
           C C+ ++ +VF+++  F  +V    G  R  +  K  PS P VS+I+P   A  +L
Sbjct: 58  CTCFAVFGVVFVSALYFLHIVGLCYGKYRLHRPTKPNPSLPGVSIIKPIIGADANL 113


>Z93395-5|CAE18034.1|  519|Caenorhabditis elegans Hypothetical
           protein ZC101.3 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -2

Query: 167 VGANKVNG*AHDDTIEARTKFSLRKSLSWFPITPRFKVDLLKESKSS 27
           VGA  V     ++TI  R  F L  SL WF      +VD LK  + S
Sbjct: 467 VGAAFVQRFLIEETITFRWPFLLIISLGWFHANTAMEVDRLKSLEKS 513


>Z83112-6|CAE17883.1|  519|Caenorhabditis elegans Hypothetical
           protein ZC101.3 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -2

Query: 167 VGANKVNG*AHDDTIEARTKFSLRKSLSWFPITPRFKVDLLKESKSS 27
           VGA  V     ++TI  R  F L  SL WF      +VD LK  + S
Sbjct: 467 VGAAFVQRFLIEETITFRWPFLLIISLGWFHANTAMEVDRLKSLEKS 513


>Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical
           protein C46F11.1b protein.
          Length = 700

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 461 SQENISIYIDLTVRSL*INLDFV-WLNCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAG 285
           S   +++Y+ L + SL +    +  L C        + YFLYIV    P +  ++ +   
Sbjct: 275 SDSLVALYLSLAISSLFVPSFMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIF 334

Query: 284 C 282
           C
Sbjct: 335 C 335


>Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical
           protein C46F11.1a protein.
          Length = 705

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 461 SQENISIYIDLTVRSL*INLDFV-WLNCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAG 285
           S   +++Y+ L + SL +    +  L C        + YFLYIV    P +  ++ +   
Sbjct: 280 SDSLVALYLSLAISSLFVPSFMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIF 339

Query: 284 C 282
           C
Sbjct: 340 C 340


>Z49068-6|CAA88857.1|  239|Caenorhabditis elegans Hypothetical
           protein K01C8.6 protein.
          Length = 239

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = +1

Query: 25  KEDFDSFRRSTLNLGVIGNQDRLLRSENFVRASMVS-----SWAHPLTLFAPTGTRINAI 189
           K+ FD    S+LN  ++GN   LL  +     S++      +W  PL + A  G  ++ +
Sbjct: 125 KKIFDKTPMSSLNTVLVGNNAILLAKDISAIKSILQETDKLNWIEPLVMMA-DGRIVDMV 183

Query: 190 RAREVGASQS 219
            ARE+    S
Sbjct: 184 DARELAKLSS 193


>X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.
          Length = 700

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 461 SQENISIYIDLTVRSL*INLDFV-WLNCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAG 285
           S   +++Y+ L + SL +    +  L C        + YFLYIV    P +  ++ +   
Sbjct: 275 SDSLVALYLSLAISSLFVPSFMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIF 334

Query: 284 C 282
           C
Sbjct: 335 C 335


>X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.
          Length = 705

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = -2

Query: 461 SQENISIYIDLTVRSL*INLDFV-WLNCTHELRPKCYCYFLYIVFLTSPNFHPVVQSPAG 285
           S   +++Y+ L + SL +    +  L C        + YFLYIV    P +  ++ +   
Sbjct: 280 SDSLVALYLSLAISSLFVPSFMINRLGCKLTFLIAIFVYFLYIVINLRPTYSSMIPASIF 339

Query: 284 C 282
           C
Sbjct: 340 C 340


>AC006633-6|AAK68378.4|  578|Caenorhabditis elegans Hypothetical
           protein F35B3.7 protein.
          Length = 578

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 144 PIDFVCAYRYSHQRHT 191
           PIDFV + RYSHQ  T
Sbjct: 302 PIDFVTSTRYSHQEAT 317


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,606,649
Number of Sequences: 27780
Number of extensions: 239052
Number of successful extensions: 527
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)