Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0671
(689 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1591 + 27967065-27967090,27967236-27968054,27984940-279850... 33 0.28
07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277 31 0.86
02_02_0294 - 8651289-8651395,8651527-8651776 30 1.5
01_06_1795 - 39925019-39926029,39926265-39926408,39927200-399272... 30 1.5
09_02_0564 + 10698710-10699294 29 2.6
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143... 29 2.6
11_03_0031 - 9094643-9095824,9095945-9096034,9096141-9096216,909... 29 3.5
10_01_0020 + 239026-239514 29 3.5
07_01_0975 + 8223269-8224354 29 3.5
07_01_0032 + 258788-259201,259297-259462,260938-261443 29 3.5
04_01_0460 + 5954548-5954816,5954940-5954997 29 3.5
03_05_0346 + 23335753-23335854,23336268-23336473,23336530-233367... 29 3.5
06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281 29 4.6
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 28 6.1
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120... 28 6.1
01_06_0644 + 30821811-30821855,30822707-30822976,30823079-308243... 28 6.1
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709... 28 8.0
10_08_0439 - 17926021-17927133 28 8.0
06_01_0884 - 6777988-6777997,6778403-6778530,6778537-6778606,678... 28 8.0
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 28 8.0
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 28 8.0
>07_03_1591 + 27967065-27967090,27967236-27968054,27984940-27985022,
27985590-27985744,27985956-27986461,27986551-27986703,
27987146-27987485,27987558-27987822,27987897-27988634,
27989734-27989779,27989849-27990223,27991511-27991567,
27991640-27992438
Length = 1453
Score = 32.7 bits (71), Expect = 0.28
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Frame = -1
Query: 398 DNHGLRDNGIDTGSGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTM 219
+N G R G GSG GR +N + E + GG+ + + G +G
Sbjct: 981 NNKGKRKRGRPRGSGVGGGRGRKAVRRNLIDEWAEGPVGGECSMRSEEGWLGVGGGVGVG 1040
Query: 218 AGPTEIGSNS-----LTMAGPTEMGSNSSMMAGPTAIGT-KSSMMGAGPAT 84
G IG S L ++G S+S +AG A+ T +S +G G AT
Sbjct: 1041 VGGGVIGQKSTSPANLVVSGFFSAASDSQRLAGKVAVITGGASGIGKGTAT 1091
>07_03_1065 + 23711677-23711837,23711859-23712180,23713071-23713277
Length = 229
Score = 31.1 bits (67), Expect = 0.86
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 1/96 (1%)
Frame = -1
Query: 338 ASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMG 159
ASLV +D+ +GG+ RVV G G + +G S AG G
Sbjct: 50 ASLVSSTSDVRHSVGGGDGGRGRVVVVPGEGSGGNGGNGGSGGKAGSGGSGGRAGSAGSG 109
Query: 158 SNSSMMAGPTAIGTKSSMMGAGPATPGFTRPL-VGP 54
N A G + A + RP+ VGP
Sbjct: 110 GNGGRPGNSEATGAADEAVAAPSISCSPARPVHVGP 145
>02_02_0294 - 8651289-8651395,8651527-8651776
Length = 118
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 70 LVNPGVA-GPAPIIDDFVPIAVGPAIIDEFEPISVGP 177
L +P +A G PI+D P GPA+ E PIS P
Sbjct: 36 LASPAMARGDRPILDFVPPRLDGPALCSEIPPISAHP 72
>01_06_1795 -
39925019-39926029,39926265-39926408,39927200-39927277,
39927722-39927838,39927925-39927981,39928492-39928623,
39928725-39928922,39929364-39929474,39929570-39929785,
39929879-39930064,39930590-39931192
Length = 950
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 88 AGPAPIIDDFVPIAVGPAIIDEFEPISVGPAIVNEFEPIS--VGPA 219
A P P + +P A P ++D EP+S P + + F + +GPA
Sbjct: 821 ATPQPAKEQVIPSAPPPDLLDLGEPVSSSPPLADPFTQLEGLLGPA 866
>09_02_0564 + 10698710-10699294
Length = 194
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Frame = -3
Query: 222 DGRPNGDRFEFVDNGRSDGNGLELIYDGRSDS-DRYKVVDD------GSRSGNA-GIHQA 67
D D V G +G G E++ GR D DR VV + GS +G GI +
Sbjct: 98 DRGSGADEVVVVGGGAGEG-GDEVVVGGRGDEEDRVVVVGEERGEKLGSDNGCVEGIREG 156
Query: 66 L--SRAGDSNGHHGSEGQEE 13
+ S G+ NG G E +EE
Sbjct: 157 IADSDRGEGNGEEGKEKEEE 176
>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
19118884-19118950,19119229-19119284,19119530-19119590,
19120181-19120297,19120570-19120682,19120774-19120848,
19121464-19122045,19122056-19122271,19122372-19122497,
19126152-19126190,19126266-19126360,19126423-19126962,
19127102-19127327,19127385-19127437,19127534-19127701,
19128353-19128707,19128785-19128876,19129891-19129993
Length = 1717
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 383 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 285
R G G G RGR++L + D HE SA+S+
Sbjct: 1038 RGGGGRRGRGRGRGRSALAENDMDFHETSALSS 1070
>11_03_0031 -
9094643-9095824,9095945-9096034,9096141-9096216,
9096759-9096976,9097283-9097512,9097617-9097683,
9097863-9098048,9098164-9098295,9098380-9098492,
9098771-9098777
Length = 766
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 130 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 252
+G IDE+ I PA+ F+P+ V VDE + I G
Sbjct: 247 IGATTIDEYRKHIEKDPALERRFQPVKVPEPTVDETIGILKG 288
>10_01_0020 + 239026-239514
Length = 162
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 168 RRTCHCQRIRTYLRWACHR 224
R +CHCQR++ LRW C +
Sbjct: 90 RSSCHCQRVK--LRWFCEK 106
>07_01_0975 + 8223269-8224354
Length = 361
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = -1
Query: 257 SGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGT 117
SGP+ G S GP+ G+ S GP+ G+ + GP++ G+
Sbjct: 287 SGPSSYGAASGPAEGPSSSGAASGPAEGPSPSGA-AGPAEGPSSYGS 332
>07_01_0032 + 258788-259201,259297-259462,260938-261443
Length = 361
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = -1
Query: 317 NDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMA 138
NDL A N + + SG IG + A T + SNS + GPT + ++ +
Sbjct: 173 NDLLTIFAKFNFTAKDLAVLSGAHTIG-KAHCSAFSTRLYSNSSSNGGPTLDANYTTALR 231
Query: 137 GPTAIGTKSSMMGAGPATP 81
G +G +++ P TP
Sbjct: 232 GQCKVGDVDTLVDLDPPTP 250
>04_01_0460 + 5954548-5954816,5954940-5954997
Length = 108
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 506 DHWLGSNGSNVSNLDRLGDG-AIDNNHGFSNDFGFVNDNHGLRDNGIDTGSGD 351
D+ GS + + +G G ++DN+H D NHG D G TG+GD
Sbjct: 37 DNTGGSTSAKHTLPQAVGSGTSVDNHHAIPRD---QYSNHGGDDGGGSTGTGD 86
>03_05_0346 +
23335753-23335854,23336268-23336473,23336530-23336705,
23336832-23337064,23337546-23337963,23338045-23338262,
23338905-23339168
Length = 538
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = -1
Query: 359 SGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTM 180
SG A +DV + H+ + S+GG+R +SG + ++ +A G + T
Sbjct: 106 SGVQERNADPIDVSSSTHDDTVQSSGGERFARSESGSDSQHSKTAKLAATCSSGGSECTG 165
Query: 179 AGPTEMGSN 153
E S+
Sbjct: 166 EEAKESSSS 174
>06_03_0961 + 26331266-26332151,26332244-26332393,26332761-26333281
Length = 518
Score = 28.7 bits (61), Expect = 4.6
Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 5/137 (3%)
Frame = -1
Query: 488 NGSNVSNLDRLGDGAIDNNHGFSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDVQNDL 309
+GSN + G G+ N+ G S + SG G S +
Sbjct: 230 SGSNSGSSSSSGSGSNSNSIGGSGSSSGAGSGSSASSGYGGSSSGSMSGSGS-----SSS 284
Query: 308 HERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGP- 132
+ +S G + + +N+ +M+G +S + G + GSNS +G
Sbjct: 285 SGSTGMSYGSSGAGSFSGSSSGSNSNAGSMSGANSGAGSSSSAYGASGSGSNSMSDSGSS 344
Query: 131 ----TAIGTKSSMMGAG 93
+A G+ SS GAG
Sbjct: 345 SGSVSASGSGSSNSGAG 361
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -1
Query: 299 SAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIG 120
S++S+ G + SG E+G S+ G +G+++ + P MG +S + GP +G
Sbjct: 258 SSISSPGPPSLQACSG-LELGVGSNGGFGLGALGASAAMQSIPDLMGGSSGLTGGP--VG 314
Query: 119 TKSSMMGAG 93
+ + + AG
Sbjct: 315 SAAMRLPAG 323
>04_03_0784 -
19610370-19611548,19611830-19611919,19612001-19612076,
19612917-19613134,19613333-19613548,19613974-19614159,
19614242-19614364,19614456-19614571,19615126-19615588
Length = 888
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 130 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 252
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 370 IGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILRG 411
>01_06_0644 +
30821811-30821855,30822707-30822976,30823079-30824383,
30824551-30824692,30824752-30825275
Length = 761
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 383 RDNGIDTGSGDNRGRASLVDVQNDLHERSAVSN 285
R G G G RGR++L + D HE SA S+
Sbjct: 25 RGGGGRRGRGRGRGRSALAENDMDFHETSAPSS 57
>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
7097150-7097367,7097502-7097717,7097922-7098107,
7098181-7098303,7098399-7098514,7099254-7099832,
7101485-7101517,7102485-7103679,7103732-7103797,
7104843-7104905,7105328-7105411
Length = 1407
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 130 VGPAIIDEFEP-ISVGPAIVNEFEPISVGPAIVDEFVPISVG 252
+G +DE+ I PA+ F+P+ V VDE + I G
Sbjct: 889 IGATTLDEYRKHIEKDPALERRFQPVRVPEPTVDETIEILRG 930
>10_08_0439 - 17926021-17927133
Length = 370
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = -1
Query: 248 TEIGTNSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMG----AGPATP 81
T ++ A PT+ S+S + +++ + + M GP + T M G AG ATP
Sbjct: 72 TSASAAAAAAASPTQSSSSSAATSPSSDLSAFLNSMLGPLNLRTDERMPGTTSAAGTATP 131
>06_01_0884 -
6777988-6777997,6778403-6778530,6778537-6778606,
6780057-6780173,6780889-6781044,6781843-6781880,
6792858-6792902,6793606-6793671,6794348-6794527,
6794575-6794697
Length = 310
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 604 PESGHGGHVDID-RYSVKGLRKSDSGCGNDGSRTITGLGA 488
P + GG+ DID RYS + LR GCG+ + G GA
Sbjct: 63 PGARLGGNADIDLRYSAR-LRSCRRGCGDACADASAGQGA 101
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 186 DNGRSDGNGLELIYDGRSDSDRYKVVDDGSRSGNAGIHQALSRAGDSNGHHGSEGQEE 13
DNG +GNG G S+ +V + S+ AG + A +NG+ + +EE
Sbjct: 134 DNGNGNGNGY-----GNSNGREVQVANASSKRVVAGATDGKTAASGANGNKQQQKEEE 186
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 27.9 bits (59), Expect = 8.0
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Frame = -1
Query: 500 WLGSNGSNVSNLDRLGDGAIDNNHGFSNDFGFVNDNHGLRDNGIDTGSGDNRGRASLVDV 321
W G N +V L + GA FG + G+ G S +
Sbjct: 254 WRGGNVGSVGGLPQATPGATAPQQATPGGFGLTLSS----TMGMAPGQQAQGTPPSSMPP 309
Query: 320 QNDLHERSAVS-NGGKRRVVYDSGPTE-IGTNSSTMAGPTEIGSNSLTMAGPTEMGSN-S 150
Q++ SAVS K V+ +G +G ++ + T+ SN T++ PT M N S
Sbjct: 310 QSN----SAVSAQDSKALVLSGNGSASGLGASNDIFSALTQPKSNVSTLSFPTSMAPNSS 365
Query: 149 SMMAGPTAIGTKSSMMGAG 93
S M+ P+ S++ G
Sbjct: 366 SFMSTPSGSQNLSNLAQFG 384
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,759,647
Number of Sequences: 37544
Number of extensions: 358513
Number of successful extensions: 1461
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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