Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0671
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    27   0.42 
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    26   0.97 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.7  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   1.7  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   9.1  

>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = -1

Query: 164 MGSNSSMMAGPTAIGTKSSMMGAGPATPGFTRPLVG 57
           +G+ SS   G   +G  S + G GP++PG    LVG
Sbjct: 15  LGNGSSSSGGGVGLG--SGIGGTGPSSPGEESALVG 48


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
 Frame = -1

Query: 395 NHGLRDNGIDTGSGDNRGRASLVDV---QNDLHERSAVSNGGKRRVVYDSGPTEIGTNSS 225
           N G   N  + G G+++ + S V+    + + +  +  +NG       +SG +    ++S
Sbjct: 68  NTGNSGNNNNNGVGNHQQQPSPVNEGTGKTNNNNNNNNNNGSNTGATVNSGSSNAALSNS 127

Query: 224 TMAGPTEIGSNSLTMAGPTEMGSNS 150
           ++   +  GS + T   PT  G+ +
Sbjct: 128 SVLNGSNSGSATTTTTTPTNPGNGN 152



 Score = 23.4 bits (48), Expect = 6.9
 Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
 Frame = -1

Query: 401 NDNHGLRDNGIDTG----SGDNRGRASLVDVQNDLHERSAVSNGGKRRVVYDSGPTEIGT 234
           N+N+   +NG +TG    SG +    S   V N  +  SA +         +        
Sbjct: 99  NNNNNNNNNGSNTGATVNSGSSNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGGSNNN 158

Query: 233 NSSTMAGPTEIGSNSLTMAGPTEMGSNSSMMAGPTAIGTKSSMMGAGPATPG 78
           N+S  +       +S T    T  G       G T   TK+   G G  T G
Sbjct: 159 NNSNSSSSCNNHVSSNTNNNGTTNGGGELTTGGGTNGCTKAGGGGGGTGTGG 210


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +2

Query: 263 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 370
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 521 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 562


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 6/42 (14%)
 Frame = +2

Query: 263 RQPSSCPRC*----QHSSRANHFE-HQPG*-LCPYCPRTRCR 370
           R+P +  RC     + ++R +HF  H P   LCPYCP +  R
Sbjct: 497 REPGTAWRCRSCGKEVTNRWHHFHSHTPQRSLCPYCPASYSR 538


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -1

Query: 317 NDLHERSAVSNGGKRRVVYDSGPTEIGTNSSTMAGPTEIGSNSLTMA 177
           N  H+ +   NGG+RR  Y       G N  T+A    IG + + M+
Sbjct: 82  NIYHKFTEEMNGGRRRKRYAD-----GANLLTIADERAIGESDVIMS 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,502
Number of Sequences: 2352
Number of extensions: 12604
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)