Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0669
         (766 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.29 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.5  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    23   2.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.2  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 334 YDDTRPNLVQPNDISL 381
           YDD R  L+ PND+S+
Sbjct: 187 YDDLRDQLLMPNDVSI 202


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 665 RSTRPRGSSGCTDSDRCDL 721
           +S R + SS C + +RCDL
Sbjct: 37  QSFRKQNSSSCGNGNRCDL 55


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 30  FPKKSSPTSLKISTKM*IPQISVLYLVGRR 119
           +P K     L I TKM + Q+S  +   RR
Sbjct: 111 YPTKGEKIMLAIITKMTLTQVSTWFANARR 140


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 310 TEWYNYPTYDDTRPNLVQ 363
           T WY++PT     P+L +
Sbjct: 28  TPWYDFPTNQKYYPSLAK 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,011
Number of Sequences: 336
Number of extensions: 4816
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)