Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0669
         (766 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ...    30   1.9  
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem...    29   3.4  
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70...    29   3.4  
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70...    29   3.4  
At1g03260.1 68414.m00304 expressed protein                             29   3.4  
At1g33430.1 68414.m04138 galactosyltransferase family protein co...    29   4.5  
At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containi...    28   5.9  
At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /...    28   7.8  
At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /...    28   7.8  
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m...    28   7.8  
At3g42060.1 68416.m04315 myosin heavy chain-related                    28   7.8  

>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3
           Pfam PF00400: WD domain, G-beta repeats;
          Length = 1327

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 512 WCYSRGPELGILACCRQPDLRPQLRHPDYA 601
           WC+ R P L IL C +   +   + HP Y+
Sbjct: 259 WCHPRAPNLDILTCVKDSHIW-SIEHPTYS 287


>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
            membrane-type, putative / Ca2+-ATPase, putative (ACA7)
            identical to SP|O64806 Potential calcium-transporting
            ATPase 7, plasma  membrane-type (EC 3.6.3.8)
            (Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
            similarity to SP|O81108 Calcium-transporting ATPase 2,
            plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
            2) {Arabidopsis thaliana}
          Length = 1015

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 166  WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 50
            WI  A+G  +  L GS      NT I   ++F  +FNEV
Sbjct: 903  WILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEV 941


>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
           putative contains Pfam profile: PF00012 Heat shock hsp70
           proteins; similar to heat-shock proteins GB:CAA94389,
           GB:AAD55461 [Arabidopsis thaliana]
          Length = 736

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -3

Query: 392 WSLSKEMSLGCTKLGRVSSYVG*LYHSVDSEMYSGVVKFVTPAR 261
           W + +++ +GC K+G++   V  L  S  S  +  ++K VT +R
Sbjct: 654 WRICRKLRIGCMKMGKMRPKVFMLQSSRSSRRWVTLLKCVTRSR 697


>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
           putative contains Pfam profile: PF00012 Heat shock hsp70
           proteins; similar to heat-shock proteins GB:CAA94389,
           GB:AAD55461 [Arabidopsis thaliana]
          Length = 736

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -3

Query: 392 WSLSKEMSLGCTKLGRVSSYVG*LYHSVDSEMYSGVVKFVTPAR 261
           W + +++ +GC K+G++   V  L  S  S  +  ++K VT +R
Sbjct: 654 WRICRKLRIGCMKMGKMRPKVFMLQSSRSSRRWVTLLKCVTRSR 697


>At1g03260.1 68414.m00304 expressed protein
          Length = 274

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = -1

Query: 718 VTPIRIGTP*GSTWTSGPPLSPWQVDCDVTLKNLAQIAFGVIRVPKLR---AQVGLATA 551
           VTP+R+G    +TW    P++   V    TLK+L+ I  G   V   R     VG+A A
Sbjct: 157 VTPVRLGEYMLATWLGMMPITFALVYVGTTLKDLSDITHGWHEVSVFRWVIMMVGVALA 215


>At1g33430.1 68414.m04138 galactosyltransferase family protein
           contains Pfam profile: PF01762 galactosyltransferase
          Length = 395

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -3

Query: 443 DDCTRIGWRYLVKTTGRWSLSKEMSLGCTKLGRVSSYVG*LYH 315
           DD   +    LV T  R+     + +GC K G V S  G  YH
Sbjct: 229 DDDVHVNLGMLVTTLARYQSRPRIYIGCMKSGPVLSQKGVKYH 271


>At4g11400.1 68417.m01838 ARID/BRIGHT DNA-binding domain-containing
           protein / ELM2 domain-containing protein / Myb-like
           DNA-binding domain-containing protein similar to
           BRG1-binding protein ELD/OSA1 [Homo sapiens]
           GI:18568414; contains Pfam profiles PF01388: ARID/BRIGHT
           DNA binding domain, PF01448: ELM2 domain, PF00249:
           Myb-like DNA-binding domain
          Length = 573

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 184 LRWLYRPQGVGDHCSSLCC 240
           LR+  RP  +  HCSS CC
Sbjct: 307 LRYSIRPPNLSKHCSSSCC 325


>At5g39990.1 68418.m04849 glycosyltransferase family 14 protein /
           core-2/I-branching enzyme family protein contains Pfam
           profile: PF02485 Core-2/I-Branching enzyme
          Length = 447

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 59  EDINKDVDTTNLRIVSGWEATPGQHPHHAAL 151
           E+       ++L  +S W+  P QHPHH  L
Sbjct: 325 EEFRNTTVNSDLHFIS-WDNPPKQHPHHLTL 354


>At5g15050.1 68418.m01764 glycosyltransferase family 14 protein /
           core-2/I-branching enzyme family protein contains Pfam
           profile: PF02485 Core-2/I-Branching enzyme
          Length = 434

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
 Frame = +2

Query: 86  TNLRIVSGWEATPGQHPHHAAL----RMVD 163
           ++L  +S W+  P QHPHH  L    RMVD
Sbjct: 321 SDLHFIS-WDNPPKQHPHHLTLDDFQRMVD 349


>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
            membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
            to SP|O81108 Calcium-transporting ATPase 2, plasma
            membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
            {Arabidopsis thaliana}
          Length = 1014

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 166  WIHHAEGGVVGVLTGSRLPTRYNTEICGIYIFVDIFNEV 50
            WI  A+G  +  L G       NT I   ++F  +FNE+
Sbjct: 902  WILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEI 940


>At3g42060.1 68416.m04315 myosin heavy chain-related
          Length = 712

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 50  YFIEDINKDVDTTNLRIVSGWEATPGQHPHHAA 148
           +F +  +  VD TNL  V+ W   PG  P H A
Sbjct: 301 FFAKLSDVSVDDTNLSCVNIWNFNPGFVPRHEA 333


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,204,861
Number of Sequences: 28952
Number of extensions: 446753
Number of successful extensions: 1284
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)