Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0668
         (760 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   9.5  

>SB_13908| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 629

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
 Frame = -1

Query: 751 QPEVERRRLMKTQLRSEQPTMAAIVQKHLHQGSEW*RRQLLLGVD------PGCLQPYVT 590
           QP ++   ++        P+   +V   L +G+E  R ++L  +D      PG L+P + 
Sbjct: 194 QPLIDHISMLNKVKLIRMPSRQGLVPARL-RGAEEARGEVLTFLDSHCEATPGWLEPLLV 252

Query: 589 KTSEKAQPVHCPILELLS 536
           + +E  + V CP++E+++
Sbjct: 253 RIAEDRRNVVCPVIEVIN 270


>SB_21644| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 787

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -3

Query: 590 KDFREGAARSLSHTRTTFSQNSLLAANMINSRMCSGY*RIWGVLVVFLCANNAR 429
           +D RE +  SL    TTF+ + +L  + +N ++ S Y      + +FL A   R
Sbjct: 573 RDLRESSLCSLGSWLTTFNWDCVLNLSSVNEKVHSFYEIFCKAIEIFLPARRVR 626


>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2656

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -1

Query: 184  FLNHCSITILAMNFSYLAELYYCLVFPIMLRFILLILYIMNTMFIKYLII 35
            +L  C+I + A++ S L  LY C +    L   L  LY+   +F+ YL +
Sbjct: 1726 YLCLCAICVFALSVS-LRYLYLCAICIFALSVSLHYLYLCVFVFLPYLCL 1774


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,325,226
Number of Sequences: 59808
Number of extensions: 412535
Number of successful extensions: 1021
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)