Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0668
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79639-1|AAB62283.1|  746|Homo sapiens EXT1 protein.                   36   0.21 
BC001174-1|AAH01174.1|  746|Homo sapiens exostoses (multiple) 1 ...    36   0.21 
DQ524014-1|ABI35526.1|  119|Homo sapiens immunoglobulin heavy ch...    30   7.9  
BC095506-1|AAH95506.1|  345|Homo sapiens GPR81 protein protein.        30   7.9  

>S79639-1|AAB62283.1|  746|Homo sapiens EXT1 protein.
          Length = 746

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 22/82 (26%), Positives = 44/82 (53%)
 Frame = +1

Query: 514 AASSEFCEKVVLVWDSERAAPSLKSLSRMAGDSRDPLPVIVVDATTHYPGEGVSARWQPL 693
           AA S++C +++++W+ ++  P+       A      +PV+V++  +    + +S+R+ P 
Sbjct: 504 AAKSQYCAQIIVLWNCDKPLPAKHRWPATA------VPVVVIEGES----KVMSSRFLPY 553

Query: 694 WAVPTAAVFSLDGDAPLLAEEL 759
             + T AV SLD D  L   E+
Sbjct: 554 DNIITDAVLSLDEDTVLSTTEV 575


>BC001174-1|AAH01174.1|  746|Homo sapiens exostoses (multiple) 1
           protein.
          Length = 746

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 22/82 (26%), Positives = 44/82 (53%)
 Frame = +1

Query: 514 AASSEFCEKVVLVWDSERAAPSLKSLSRMAGDSRDPLPVIVVDATTHYPGEGVSARWQPL 693
           AA S++C +++++W+ ++  P+       A      +PV+V++  +    + +S+R+ P 
Sbjct: 504 AAKSQYCAQIIVLWNCDKPLPAKHRWPATA------VPVVVIEGES----KVMSSRFLPY 553

Query: 694 WAVPTAAVFSLDGDAPLLAEEL 759
             + T AV SLD D  L   E+
Sbjct: 554 DNIITDAVLSLDEDTVLSTTEV 575


>DQ524014-1|ABI35526.1|  119|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 119

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -2

Query: 684 PSCRNTFTRVVSG-SVDNYYWEWIPAVSSHT*QRLQRRRSPFTVPY 550
           PS   + T  VSG S+ NYYW WI   + +T + + R  S  +  Y
Sbjct: 13  PSETLSLTCTVSGGSISNYYWSWIRQPAGNTLEWIGRIYSSGSTNY 58


>BC095506-1|AAH95506.1|  345|Homo sapiens GPR81 protein protein.
          Length = 345

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 23/62 (37%), Positives = 31/62 (50%)
 Frame = +1

Query: 529 FCEKVVLVWDSERAAPSLKSLSRMAGDSRDPLPVIVVDATTHYPGEGVSARWQPLWAVPT 708
           FC    +VW S R    L   +RM   +R  + V +V  T + P   VSAR   LW VP+
Sbjct: 193 FCS-FKIVW-SLRRRQQLARQTRMKKATRFTMVVAIVFITCYLPS--VSARLYFLWTVPS 248

Query: 709 AA 714
           +A
Sbjct: 249 SA 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,117,569
Number of Sequences: 237096
Number of extensions: 1999295
Number of successful extensions: 6481
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6479
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)