Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0667
         (545 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0691 - 5224260-5224277,5224663-5224733,5224774-5224953,522...    29   1.8  
06_03_0121 + 16864735-16865619,16865706-16866026                       29   2.4  
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988...    28   5.6  
03_02_0877 - 12072996-12073285,12074312-12074615,12074699-120748...    28   5.6  
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896...    27   7.4  

>07_01_0691 -
           5224260-5224277,5224663-5224733,5224774-5224953,
           5226391-5227072
          Length = 316

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 378 EGTKLFGNRRQIE--NEKRYIRQKIRFLGQSLHEALLDPDCCWC 503
           E  KL G+   +   NEKRY+          L EA+LD   CWC
Sbjct: 260 EANKLSGDELMLAQINEKRYLIDLPHRTDIRLSEAILDYCWCWC 303


>06_03_0121 + 16864735-16865619,16865706-16866026
          Length = 401

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = -3

Query: 396 QIILFLLIVFQPFDVHQ*TFERSGVVIFYKISPHSRQPVSRIHVFRFV 253
           ++++F    +  F +    F R G++ FY+IS H   P S +H+  FV
Sbjct: 54  EVVVFSHFFYGGFALPTSKFFR-GILSFYRISLHHLNPNSIVHIANFV 100


>05_05_0156 +
           22792783-22793410,22797153-22797227,22797644-22798879,
           22798947-22799155,22799240-22800209,22800395-22800465
          Length = 1062

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 15  SEKITHES--LQAYIDYFSDSMFKYSIMKSANSTLGNLISRYICTNLLTSV 161
           S+++T  +  +  Y +   DS+  Y   ++ N  L NLI   +C NL   V
Sbjct: 251 SQEVTESNSLISLYYEMPEDSLRSYKDKRAGNGHLINLIDSPVCCNLSNDV 301


>03_02_0877 -
           12072996-12073285,12074312-12074615,12074699-12074871,
           12075299-12075434,12076327-12076788,12076882-12077189,
           12077724-12078105
          Length = 684

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +1

Query: 304 DFVKYDDPTAFESLLMNVKWLEYNEKEQNYLEIG---AKLKMKKDIFVKRY 447
           D VK++ P AF   L++   +EY+ K +   E+G     +K   D F+K +
Sbjct: 167 DAVKFNFPAAFSMTLLSWSVIEYSAKYEAVGELGHIRDTIKWGADYFLKTF 217


>01_01_1130 +
           8959909-8960396,8960588-8960638,8960736-8960827,
           8960964-8961054,8961877-8961937,8962172-8962216,
           8962318-8962391,8962565-8962637,8963288-8963345,
           8963398-8963468,8963801-8963837,8964040-8964128,
           8964207-8964263,8964366-8964449,8964529-8964627,
           8964765-8964869,8965145-8965216,8965308-8965497,
           8965810-8966207
          Length = 744

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = +3

Query: 30  HESLQAYIDYFSDSMFKYSIMKSANSTLGNLI 125
           H+ +Q+Y+D +SDS   + I+ S    + N++
Sbjct: 665 HQDIQSYLDNYSDSDMWHLIVHSVARVISNVL 696


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,998,396
Number of Sequences: 37544
Number of extensions: 277659
Number of successful extensions: 562
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)