Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0667
(545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81112-1|CAB03272.2| 673|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z77136-2|CAB00884.3| 670|Caenorhabditis elegans Hypothetical pr... 33 0.18
U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical p... 33 0.18
U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical p... 33 0.18
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 29 2.9
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 29 2.9
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 29 2.9
U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical pr... 27 6.7
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 27 6.7
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 27 6.7
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 27 8.8
AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical ... 27 8.8
AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z81112-3|CAB03273.1| 656|Caenorhabditis elegans Hypothetical
protein T02B5.3 protein.
Length = 656
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 8/95 (8%)
Frame = +1
Query: 232 FGFLRSRYKPKDMDTRDRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQNY--LEIG 405
FG R + PKD + M+ DF+ ++DP S + WL+Y ++ + Y ++
Sbjct: 441 FGTHRGVFAPKDYVIEYIYSGMFADFINFEDP----SPSTDQPWLQYTKENKEYFLVDFD 496
Query: 406 AKLK---MKKDIFVKRYVFWDKVYTKHY---WTPT 492
L MKK+ + K Y FW K + W+P+
Sbjct: 497 QNLTMPGMKKNYYAKAYEFWSTAGQKSFKEEWSPS 531
>U97549-7|AAB52848.3| 565|Caenorhabditis elegans Hypothetical
protein F15A8.6 protein.
Length = 565
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 250 RYKPKDMDTRDRLTTMWTDFVKYDDPTA--FESLLMNVKWLEYNEKE-QNYLEIGAKLKM 420
RY D D +T MWT+F KY +P +S + + KW +++E N+L I K
Sbjct: 483 RYNESDRAMLDLMTKMWTNFAKYGNPNGQYEDSTVFDFKWEPTSKEEPTNFLAINEKKCE 542
Query: 421 KKDIFV-KRYVFWDKV 465
+ ++ R FW K+
Sbjct: 543 MQTVYQDNRAEFWKKI 558
>Z81112-1|CAB03272.2| 673|Caenorhabditis elegans Hypothetical
protein T02B5.1 protein.
Length = 673
Score = 34.3 bits (75), Expect = 0.058
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +1
Query: 232 FGFLRSRYKPKDMDTRDRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQNYLEIGAK 411
FG R + PKD + M+ DFV +++P + KW +Y ++ + + I
Sbjct: 456 FGTHRGIFAPKDYIIEKIYSGMFADFVNFENPLPSG----DQKWNQYTKENREHFLINFD 511
Query: 412 LK-----MKKDIFVKRYVFWDKVYTKHY---WTPT 492
M+ + + + Y FW V K + W+P+
Sbjct: 512 KNFITPGMRDNYYTEAYEFWSTVGKKSFKEEWSPS 546
>Z77136-2|CAB00884.3| 670|Caenorhabditis elegans Hypothetical
protein ZC376.2 protein.
Length = 670
Score = 32.7 bits (71), Expect = 0.18
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Frame = +1
Query: 232 FGFLRSRYKPKDMDTRDRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQNYLEIGAK 411
FG R + KD + M+ DFV + DP+ E + +W +Y +++ Y I
Sbjct: 457 FGTNRGNFSTKDYVIEYIYSGMFADFVNFGDPSPLE----DQEWAQYTPEKREYFLIDFD 512
Query: 412 LK-----MKKDIFVKRYVFWDKVYTKHYWTPTAVGVEI 510
MK + K FW +K + + V+I
Sbjct: 513 KNFTMPGMKDHYYPKALEFWSTCGSKSFKEHFSPSVDI 550
>U80023-13|AAG24043.2| 348|Caenorhabditis elegans Hypothetical
protein F07C4.12a protein.
Length = 348
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 241 LRSRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFE 339
L S +KP D D + D +TT++T+F KY +P E
Sbjct: 258 LYSDFKPDDTDWKMIDEMTTLYTNFAKYGNPNGNE 292
>U80023-12|AAY86287.1| 564|Caenorhabditis elegans Hypothetical
protein F07C4.12b protein.
Length = 564
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +1
Query: 241 LRSRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFE 339
L S +KP D D + D +TT++T+F KY +P E
Sbjct: 474 LYSDFKPDDTDWKMIDEMTTLYTNFAKYGNPNGNE 508
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 244 RSRYKPKDMDTRDRLTTMWTDFVKYDDPTAFE--SLLMNVKWLEYNEKEQNYLEI 402
R Y ++ + +R W +F K DP E S +V W +YN Y+ +
Sbjct: 484 RFNYTDEERELSNRFMRYWANFAKTGDPNKNEDGSFTQDV-WPKYNSVSMEYMNM 537
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +1
Query: 244 RSRYKPKDMDTRDRLTTMWTDFVKYDDPTAFE--SLLMNVKWLEYNEKEQNYLEI 402
R Y ++ + +R W +F K DP E S +V W +YN Y+ +
Sbjct: 484 RFNYTDEERELSNRFMRYWANFAKTGDPNKNEDGSFTQDV-WPKYNSVSMEYMNM 537
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 328 TAFESLLMNVKWLE-YNEKEQNYLEIGAKLKMKKDIFVKRYVFWDK 462
T ++ L++ W+ +NEKE +EI + +++F K FW K
Sbjct: 448 TIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTK 493
>U64853-2|AAB04975.2| 529|Caenorhabditis elegans Hypothetical
protein K11G9.2 protein.
Length = 529
Score = 27.9 bits (59), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 262 KDMDTRDRLTTMWTDFVKYDDP 327
KD+ + +TTM+T+F KY +P
Sbjct: 451 KDLKMMEYMTTMFTNFAKYGNP 472
>AL132943-3|CAB81974.1| 345|Caenorhabditis elegans Hypothetical
protein Y116F11B.6 protein.
Length = 345
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 9 FKSEKITHESLQAYIDYFSDSMFKYSIMKSANSTLGN 119
++++KITHE L AY + +DS+FK ++ + + N
Sbjct: 163 YETKKITHEQLCAY-NNSNDSLFKTAVESVLHPCINN 198
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 27.5 bits (58), Expect = 6.7
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 12 KSEKITHESLQAYIDYFSDSMFKYSIMKSANSTLGNLISRYICTN 146
+SE +HE + +YF+ S S K AN + NL S ++ +
Sbjct: 177 ESESTSHEEVMKSFEYFAQSSSSRS-KKDANKSSKNLSSNFLAAH 220
>Z81071-7|CAE11303.1| 313|Caenorhabditis elegans Hypothetical
protein F28F8.8 protein.
Length = 313
Score = 27.5 bits (58), Expect = 6.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 170 CSIYRRK*IRTNIPAYQISERGVRRFHY 87
C YRR + + AY SE+ ++ HY
Sbjct: 73 CIFYRRSNVGCTLKAYNFSEKTIKNGHY 100
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 247 SRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQNYLEIGAKLKM 420
S+++P + D + + TT++++F KY +P + + N E++Y K +M
Sbjct: 460 SKFEPTEEDRKVMETTTTLFSNFAKYGNPNGKGATAEIWEKYSLNRPERHYRISYPKCEM 519
Query: 421 KKDIFVKRYVFWDKV 465
+ R F +K+
Sbjct: 520 RDVYHEGRIQFLEKI 534
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 60 FSDSMFKYSIMKSANSTLGNLISRYICTNLL 152
F D KYS K N T+ L+ +YI T ++
Sbjct: 730 FKDFCSKYSNSKYDNKTISKLVKKYIDTRIV 760
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 247 SRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQNYLEIGAKLKM 420
S+++P + D + + TT++++F KY +P + + N E++Y K +M
Sbjct: 460 SKFEPTEEDRKVMETTTTLFSNFAKYGNPNGKGATAEIWEKYSLNRPERHYRISYPKCEM 519
Query: 421 KKDIFVKRYVFWDKV 465
+ R F +K+
Sbjct: 520 RDVYHEGRIQFLEKI 534
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 510 YLNTNSSRGPIMLRVNFVPEN-VSFDEYIFFHFQFGADFQIILFLLIVFQPFDV 352
Y++ + PI L N + N VSF+ YI F F + +FL+ F FD+
Sbjct: 163 YIDRQGRKSPIPLIPNIIGRNWVSFN-YILTKFLFLVNLIAQMFLIHFFLGFDL 215
>AF043697-4|AAO38636.1| 431|Caenorhabditis elegans Hypothetical
protein F56C11.6b protein.
Length = 431
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 247 SRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQ-NYLEIGA-KL 414
S+++P D D + +TT +T+F KY +P +W +++ + +I
Sbjct: 347 SKFRPNDNDKKMLHVMTTYFTNFAKYGNPNGENQ--ETGEWQKHDSAHPFRHFKIDLDDS 404
Query: 415 KMKKDIFVKRYVFWDKV 465
+M +D +R WDK+
Sbjct: 405 EMVEDYQERRAELWDKL 421
>AF043697-3|AAB97558.1| 548|Caenorhabditis elegans Hypothetical
protein F56C11.6a protein.
Length = 548
Score = 27.1 bits (57), Expect = 8.8
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 247 SRYKPKDMDTR--DRLTTMWTDFVKYDDPTAFESLLMNVKWLEYNEKEQ-NYLEIGA-KL 414
S+++P D D + +TT +T+F KY +P +W +++ + +I
Sbjct: 464 SKFRPNDNDKKMLHVMTTYFTNFAKYGNPNGENQ--ETGEWQKHDSAHPFRHFKIDLDDS 521
Query: 415 KMKKDIFVKRYVFWDKV 465
+M +D +R WDK+
Sbjct: 522 EMVEDYQERRAELWDKL 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,028,676
Number of Sequences: 27780
Number of extensions: 279220
Number of successful extensions: 821
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -