Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0663
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025457-4|AAB70966.1|  385|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF000299-2|AAC47981.2|  324|Caenorhabditis elegans Serpentine re...    30   2.0  
AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm rece...    29   3.5  
AF100655-9|ABO16446.1|  375|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF100655-7|ABO16448.1|  375|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF100655-5|ABO16449.1|  375|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF100655-3|ABO16450.1|  375|Caenorhabditis elegans Hypothetical ...    28   8.1  
AF045643-1|AAC02595.1|  338|Caenorhabditis elegans Hypothetical ...    28   8.1  

>AF025457-4|AAB70966.1|  385|Caenorhabditis elegans Hypothetical
           protein C08E3.6 protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/57 (26%), Positives = 29/57 (50%)
 Frame = -1

Query: 448 EYKMFNINKKTLNITDMHTIQHSHTYSTHNVFCYYIV*IYSQGRCGIVH*NYTFNPN 278
           +Y   NI++    + D+H+++H+H Y T +   +Y+   + Q    I    Y F+ N
Sbjct: 329 QYTRMNIDRLK-RVFDVHSVEHNHIYETPDKRSFYVA--FGQFMIQITKPGYQFDYN 382


>AF000299-2|AAC47981.2|  324|Caenorhabditis elegans Serpentine
           receptor, class z protein24, isoform b protein.
          Length = 324

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 20/49 (40%), Positives = 27/49 (55%)
 Frame = -3

Query: 602 VFFFLEKH*KNDNHKV*LSEESVMVGRLLKLLVSTTLYYIPYII*ELFK 456
           +F+ L+     +NH V L   + +V  L  LLV T+L YIP II   FK
Sbjct: 167 IFYLLKMITTKENHSVILDLITFIV--LNSLLVITSLLYIPIIISSKFK 213


>AF016685-8|AAG24150.1|  340|Caenorhabditis elegans Seven tm
           receptor protein 85 protein.
          Length = 340

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 590 LEKH*KNDNHKV*LSEESVMVGRLLKLLVSTTLYYIPYII 471
           LEK+  N +H     ++ +M+  +++ L+  TL YIP +I
Sbjct: 226 LEKNKLNASHHTVQLQKQLMIALIIQSLIPITLMYIPILI 265


>AF100655-9|ABO16446.1|  375|Caenorhabditis elegans Hypothetical
           protein C44C8.1 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 493 STTFRISSRNYLNKDEYKMFNINKKTLNITDMHTIQHSHTYS 368
           S  F+I      ++D  K+F   K+ L I+ + +I  SH+Y+
Sbjct: 200 SLNFKIRHLELKSEDNNKIFETIKQLLTISPLSSISLSHSYN 241


>AF100655-7|ABO16448.1|  375|Caenorhabditis elegans Hypothetical
           protein C44C8.2 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 493 STTFRISSRNYLNKDEYKMFNINKKTLNITDMHTIQHSHTYS 368
           S  F+I      ++D  K+F   K+ L I+ + +I  SH+Y+
Sbjct: 200 SLNFKIRHLELKSEDNNKIFETIKQLLTISPLSSISLSHSYN 241


>AF100655-5|ABO16449.1|  375|Caenorhabditis elegans Hypothetical
           protein C44C8.3 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 493 STTFRISSRNYLNKDEYKMFNINKKTLNITDMHTIQHSHTYS 368
           S  F+I      ++D  K+F   K+ L I+ + +I  SH+Y+
Sbjct: 200 SLNFKIRHLELKSEDNNKIFETIKQLLTISPLSSISLSHSYN 241


>AF100655-3|ABO16450.1|  375|Caenorhabditis elegans Hypothetical
           protein C44C8.4 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 493 STTFRISSRNYLNKDEYKMFNINKKTLNITDMHTIQHSHTYS 368
           S  F+I      ++D  K+F   K+ L I+ + +I  SH+Y+
Sbjct: 200 SLNFKIRHLELKSEDNNKIFETIKQLLTISPLSSISLSHSYN 241


>AF045643-1|AAC02595.1|  338|Caenorhabditis elegans Hypothetical
           protein F58H7.8 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 493 STTFRISSRNYLNKDEYKMFNINKKTLNITDMHTIQHSHTYS 368
           S  F+I      ++D  K+F   K+ L I+ + +I  SH+Y+
Sbjct: 200 SLNFKIRHLELKSEDNNKIFETIKQLLTISPLSSISLSHSYN 241


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,051,111
Number of Sequences: 27780
Number of extensions: 297658
Number of successful extensions: 573
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)