Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0662
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.7  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   9.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.3  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 511  IFLLDLLKSGLTVWWFSGIHFVYSYDE 431
            +FLL L K  L + W  G+    +YDE
Sbjct: 1283 VFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 511  IFLLDLLKSGLTVWWFSGIHFVYSYDE 431
            +FLL L K  L + W  G+    +YDE
Sbjct: 1283 VFLLTLKKDYLHIKWPFGVKTNITYDE 1309


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 168 LDKLKAERERGITIDIALWKFETSKYYVTSLMLLDT 275
           L KLK   + G  + +A  KF   K+YV  L  L T
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVILAFLLT 113


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +3

Query: 168 LDKLKAERERGITIDIALWKFETSKYYVTSLMLLDT 275
           L KLK   + G  + +A  KF   K+YV  L  L T
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVILAFLLT 39


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/33 (24%), Positives = 13/33 (39%)
 Frame = +1

Query: 496 DQEGISSYIKKIGYNPAAVAFVPISGWHGDNML 594
           D  G+ +       NP     + I GW+  N +
Sbjct: 79  DLHGLENVANLKSVNPDLKVLISIGGWNAGNAI 111


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 274 QRFHQEHDHRNLS 312
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 589 CCLRAIQKWARKRQQLGCSQSS*CMR 512
           CC  A+      RQ +  S+   C+R
Sbjct: 615 CCYHAVAPGTDIRQSIALSRKKKCIR 640


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 589 CCLRAIQKWARKRQQLGCSQSS*CMR 512
           CC  A+      RQ +  S+   C+R
Sbjct: 507 CCYHAVAPGTDIRQSIALSRKKKCIR 532


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,843
Number of Sequences: 336
Number of extensions: 3594
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)