Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0662
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 178 3e-45
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 178 3e-45
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 178 3e-45
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 178 3e-45
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 130 9e-31
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 70 2e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 70 2e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 62 5e-10
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 62 5e-10
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 62 5e-10
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 36 0.020
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 36 0.035
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 35 0.061
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.14
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 33 0.19
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 31 0.57
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 31 0.57
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.3
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.3
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.3
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.3
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.3
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.3
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical pr... 27 9.3
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 178 bits (434), Expect = 3e-45
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY+T
Sbjct: 65 AERERGITIDIALWKFETAKYYIT 88
Score = 138 bits (333), Expect = 4e-33
Identities = 82/140 (58%), Positives = 87/140 (62%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL 148
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKEYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKC 613
+ S P P +SRR T Q L D TETTC C
Sbjct: 149 V-------SLRSP----------TRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTC 191
Query: 614 LGSRDGRWSVRKAKLTENAS 673
GSRDG + RK L E S
Sbjct: 192 HGSRDGLLNARKETLPERPS 211
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 178 bits (434), Expect = 3e-45
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY+T
Sbjct: 65 AERERGITIDIALWKFETAKYYIT 88
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 140 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 195
Score = 62.5 bits (145), Expect(2) = 9e-17
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVA 340
+IDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 41.9 bits (94), Expect(2) = 9e-17
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 431 LIVGVNKMDSTEPPYSEPRFEEIKKE 508
L+V NKMDSTEPP+SE RF EI E
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNE 139
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 178 bits (434), Expect = 3e-45
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY+T
Sbjct: 65 AERERGITIDIALWKFETAKYYIT 88
Score = 156 bits (378), Expect = 2e-38
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL 148
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IV NKMDSTEPP+SE RF EI E
Sbjct: 149 IVACNKMDSTEPPFSEARFTEITNE 173
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 174 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 178 bits (434), Expect = 3e-45
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY+T
Sbjct: 65 AERERGITIDIALWKFETAKYYIT 88
Score = 156 bits (378), Expect = 2e-38
Identities = 74/85 (87%), Positives = 77/85 (90%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL 148
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IV NKMDSTEPP+SE RF EI E
Sbjct: 149 IVACNKMDSTEPPFSEARFTEITNE 173
Score = 95.9 bits (228), Expect = 2e-20
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+S +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK L+
Sbjct: 174 VSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLL 229
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 130 bits (314), Expect = 9e-31
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AER 191
+
Sbjct: 65 VTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (273), Expect = 8e-26
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
L+DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QL
Sbjct: 252 LLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQL 311
Query: 434 IVGVNKMDSTEPPYSEPRFEEIK 502
IV VNK+D+ + +S+ RF+EIK
Sbjct: 312 IVAVNKLDTVD--WSQDRFDEIK 332
Score = 100 bits (240), Expect = 8e-22
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 183 AERERGITIDIALWKFETS 239
ERERG+T+DI FETS
Sbjct: 228 EERERGVTMDIGRTSFETS 246
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (273), Expect = 8e-26
Identities = 54/83 (65%), Positives = 66/83 (79%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
L+DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QL
Sbjct: 270 LLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQL 329
Query: 434 IVGVNKMDSTEPPYSEPRFEEIK 502
IV VNK+D+ + +S+ RF+EIK
Sbjct: 330 IVAVNKLDTVD--WSQDRFDEIK 350
Score = 100 bits (240), Expect = 8e-22
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 183 AERERGITIDIALWKFETS 239
ERERG+T+DI FETS
Sbjct: 246 EERERGVTMDIGRTSFETS 264
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 1e-22
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
++DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK L
Sbjct: 191 ILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHL 250
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKEYPHTSRRLA---TTQLLSLSCPFLDG 577
++ VNKMD + E RF+EI+ + R+L T + + C L G
Sbjct: 251 VILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTG 301
Score = 92.3 bits (219), Expect = 3e-19
Identities = 41/86 (47%), Positives = 60/86 (69%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 107 KEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTND 166
Query: 183 AERERGITIDIALWKFETSKYYVTSL 260
ERE+G T+++ FET K + T L
Sbjct: 167 EEREKGKTVEVGRAYFETEKRHFTIL 192
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 260 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 439
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 440 GVNKMDSTE 466
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 31.5 bits (68), Expect = 0.57
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 176
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 177 LKAERERGITIDIALWKFET 236
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/69 (52%), Positives = 44/69 (63%)
Frame = +2
Query: 260 DAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 439
D PGH DFIKNMI GTSQ D AVL++AA G E QT+EH +LA +GVK + +
Sbjct: 114 DCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAI 166
Query: 440 GVNKMDSTE 466
+NK D E
Sbjct: 167 FINKADLVE 175
Score = 31.5 bits (68), Expect = 0.57
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 176
K ++N+ IGH+D GK+T T + + G K KF++ +DK
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE---------------IDK 85
Query: 177 LKAERERGITIDIALWKFET 236
K E++RGITI++A +E+
Sbjct: 86 GKEEKKRGITINVAHIGYES 105
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 430
ID PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 169
Query: 431 LIVGVNKMDSTEPPYSEPR 487
++V +NK+D E P +E R
Sbjct: 170 IVVFMNKVD--EVPDAETR 186
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 173
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 47 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 106
Query: 174 KLKAER 191
A+R
Sbjct: 107 YETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 430
ID PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 170
Query: 431 LIVGVNKMDSTEPPYSEPR 487
++V +NK+D E P +E R
Sbjct: 171 IVVFMNKVD--EVPDAETR 187
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 173
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 174 KLKAER 191
A+R
Sbjct: 108 YETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 61.7 bits (143), Expect = 5e-10
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQ 430
ID PGH D+IKNMITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 118 IDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDN 170
Query: 431 LIVGVNKMDSTEPPYSEPR 487
++V +NK+D E P +E R
Sbjct: 171 IVVFMNKVD--EVPDAETR 187
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 173
K H+N+ IGHVD GK+T T ++ G R E + +E +G A+ L+
Sbjct: 48 KPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFHLE 107
Query: 174 KLKAER 191
A+R
Sbjct: 108 YETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
LID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA ++
Sbjct: 76 LIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRV 128
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKK 505
I+ +NK D E ++++K
Sbjct: 129 IIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 12 INIVVIGHVDSGKSTTT 62
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/68 (42%), Positives = 35/68 (51%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 195 RGITIDIA 218
RGIT+ A
Sbjct: 74 RGITVQSA 81
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI + H+DSGK+T T ++Y G ID + +G +D + ER+
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID----------SMHEVRGKDDVGATMDFMDLERQ 95
Query: 195 RGITIDIALWKFETSKYYVTSLMLLDT 275
RGITI A + ++ T++ ++DT
Sbjct: 96 RGITIQSAATYVD---WHGTNINIIDT 119
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 36.3 bits (80), Expect = 0.020
Identities = 26/67 (38%), Positives = 31/67 (46%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH F G AD VL+VAA G E QT + A V QL+
Sbjct: 209 LDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLV 260
Query: 437 VGVNKMD 457
V VNK+D
Sbjct: 261 VAVNKID 267
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 35.5 bits (78), Expect = 0.035
Identities = 36/123 (29%), Positives = 53/123 (43%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85
Query: 195 RGITIDIALWKFETSKYYVTSLMLLDTEISSRT*SQEPLRLIALCSS*LPVPVNSKLVSL 374
RGIT+ Y L L+DT S E R +A+C L + ++ V
Sbjct: 86 RGITVKAQTAALRHRGYL---LNLIDTP-GHVDFSAEVSRSLAVCDGILLLVAANQGVQA 141
Query: 375 RTV 383
+T+
Sbjct: 142 QTI 144
Score = 33.1 bits (72), Expect = 0.19
Identities = 25/71 (35%), Positives = 34/71 (47%)
Frame = +2
Query: 245 LCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 424
L LID PGH DF + + D +L+VAA G QT + LAF +
Sbjct: 103 LLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKNI 155
Query: 425 KQLIVGVNKMD 457
Q+I +NK+D
Sbjct: 156 -QIIPVINKID 165
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 34.7 bits (76), Expect = 0.061
Identities = 21/81 (25%), Positives = 35/81 (43%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A L+VA QT EH + + L+
Sbjct: 132 VDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQLNHLM 185
Query: 437 VGVNKMDSTEPPYSEPRFEEI 499
+ NK+D + + +E+I
Sbjct: 186 ILQNKVDIIKESQARENYEQI 206
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 450 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 322
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 33.1 bits (72), Expect = 0.19
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 434 IVGVNKMDSTEPPYSEPR---FEEIKKEYP 514
++ +NK+D S PR +E +K + P
Sbjct: 605 VIALNKIDRLYEYESNPRKDVYELLKSQKP 634
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCG 86
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 245 LCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
L LID+PGH DF + D A+++V +G
Sbjct: 111 LINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation
factor protein.
Length = 852
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCG 86
N+ VI HVD GKST T L+ K G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 245 LCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
L LID+PGH DF + D A+++V +G
Sbjct: 111 LINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 93 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 93 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 512 PHTSRRLATTQLLSLSCPFLD 574
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.0
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 12 INIVVIGHVDSGKSTTT 62
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 242 VLCYLIDAPGHRDFIKNMITGTSQADCAVLIV 337
+L LID+PGH DF + + +D A+L++
Sbjct: 83 LLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 242 VLCYLIDAPGHRDFIKNMITGTSQADCAVLIV 337
+L LID+PGH DF + + +D A+L++
Sbjct: 83 LLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z48585-4|CAA88480.1| 476|Caenorhabditis elegans Hypothetical
protein ZK673.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 479 EPRFEEIKKEYPHTSRRLATTQLLSLSCPF 568
EP FEE E P TS +AT + + PF
Sbjct: 353 EPEFEEHFDEQPSTSSYMATATATATATPF 382
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,830,036
Number of Sequences: 27780
Number of extensions: 341392
Number of successful extensions: 1051
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -