Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0662
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 180 1e-47
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 178 3e-47
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 174 6e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 174 6e-46
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 31 0.008
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.2
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 180 bits (437), Expect = 1e-47
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFETSKYYVT
Sbjct: 65 AERERGITIDIALWKFETSKYYVT 88
Score = 174 bits (424), Expect = 6e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 148
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 149 IVGVNKMDSTEPPYSETRFEEIKKE 173
Score = 118 bits (283), Expect = 7e-29
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLI
Sbjct: 174 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLI 229
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 178 bits (434), Expect = 3e-47
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK
Sbjct: 5 KIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYYVT
Sbjct: 65 AERERGITIDIALWKFETAKYYVT 88
Score = 169 bits (410), Expect = 3e-44
Identities = 80/85 (94%), Positives = 82/85 (96%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQL
Sbjct: 89 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQL 148
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IVGVNKMD T+PPYSE RFEEIKKE
Sbjct: 149 IVGVNKMDMTDPPYSEARFEEIKKE 173
Score = 109 bits (262), Expect = 2e-26
Identities = 46/56 (82%), Positives = 51/56 (91%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+SSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK LI
Sbjct: 174 VSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLI 229
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 174 bits (424), Expect = 6e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL
Sbjct: 16 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 75
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 76 IVGVNKMDSTEPPYSETRFEEIKKE 100
Score = 118 bits (283), Expect = 7e-29
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLI
Sbjct: 101 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLI 156
Score = 37.1 bits (82), Expect = 2e-04
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 210 DIALWKFETSKYYVT 254
DIALWKFETSKYYVT
Sbjct: 1 DIALWKFETSKYYVT 15
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 174 bits (424), Expect = 6e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL
Sbjct: 32 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 91
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IVGVNKMDSTEPPYSE RFEEIKKE
Sbjct: 92 IVGVNKMDSTEPPYSETRFEEIKKE 116
Score = 118 bits (283), Expect = 7e-29
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLI 675
+SSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKCLI
Sbjct: 117 VSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLI 172
Score = 70.1 bits (164), Expect = 2e-14
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +3
Query: 162 WVLDKLKAERERGITIDIALWKFETSKYYVT 254
WVLDKLKAERERGITIDIALWKFETSKYYVT
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVT 31
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 31.5 bits (68), Expect = 0.008
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH FI G D VL+VAA G E QT + +A V +I
Sbjct: 198 LDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV-PII 249
Query: 437 VGVNKMDSTEPPYSEPRFEEIK 502
V +NK+D + ++E K
Sbjct: 250 VAINKIDKPNIDIIKVQYELAK 271
Score = 25.4 bits (53), Expect = 0.50
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKST 56
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 12 INIVVIGHVDSGKST 56
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 609 FG*RLQHVVSVPSRNGHESDSSWV 538
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,893
Number of Sequences: 438
Number of extensions: 4367
Number of successful extensions: 21
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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