Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0662
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 161 5e-40
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 161 5e-40
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 161 5e-40
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 161 5e-40
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 101 6e-22
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 94 7e-20
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 62 2e-10
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 62 4e-10
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 39 0.003
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 39 0.003
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 38 0.008
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.019
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.043
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.043
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 35 0.057
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 33 0.13
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 33 0.13
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.23
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 31 0.53
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.70
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 31 0.70
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 31 0.93
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 2.1
At4g20430.1 68417.m02981 subtilase family protein contains Pfam ... 29 2.1
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 29 2.1
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 29 2.1
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 29 2.8
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 29 2.8
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.8
At5g13650.2 68418.m01585 elongation factor family protein contai... 29 3.7
At5g13650.1 68418.m01584 elongation factor family protein contai... 29 3.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 3.7
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 4.9
At4g03000.2 68417.m00408 expressed protein contains similarity t... 27 8.6
At4g03000.1 68417.m00407 expressed protein contains similarity t... 27 8.6
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 161 bits (390), Expect = 5e-40
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY T
Sbjct: 65 AERERGITIDIALWKFETTKYYCT 88
Score = 142 bits (344), Expect = 2e-34
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVK
Sbjct: 87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Query: 428 QLIVGVNKMDSTEPPYSEPRFEEIKKE 508
Q+I NKMD+T P YS+ R++EI KE
Sbjct: 147 QMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 161 bits (390), Expect = 5e-40
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY T
Sbjct: 65 AERERGITIDIALWKFETTKYYCT 88
Score = 142 bits (344), Expect = 2e-34
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVK
Sbjct: 87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Query: 428 QLIVGVNKMDSTEPPYSEPRFEEIKKE 508
Q+I NKMD+T P YS+ R++EI KE
Sbjct: 147 QMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 161 bits (390), Expect = 5e-40
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY T
Sbjct: 65 AERERGITIDIALWKFETTKYYCT 88
Score = 142 bits (344), Expect = 2e-34
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVK
Sbjct: 87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Query: 428 QLIVGVNKMDSTEPPYSEPRFEEIKKE 508
Q+I NKMD+T P YS+ R++EI KE
Sbjct: 147 QMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 161 bits (390), Expect = 5e-40
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLK
Sbjct: 5 KFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLK 64
Query: 183 AERERGITIDIALWKFETSKYYVT 254
AERERGITIDIALWKFET+KYY T
Sbjct: 65 AERERGITIDIALWKFETTKYYCT 88
Score = 142 bits (344), Expect = 2e-34
Identities = 67/87 (77%), Positives = 76/87 (87%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVK
Sbjct: 87 CTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVK 146
Query: 428 QLIVGVNKMDSTEPPYSEPRFEEIKKE 508
Q+I NKMD+T P YS+ R++EI KE
Sbjct: 147 QMICCCNKMDATTPKYSKARYDEIIKE 173
Score = 65.7 bits (153), Expect = 3e-11
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 508 ISSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKG 627
+SSY+KK+GYNP + FVPISG+ GDNM+E ST + W+KG
Sbjct: 174 VSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 101 bits (241), Expect = 6e-22
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
++DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + GQTREH LA TLGV +L
Sbjct: 183 ILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKL 242
Query: 434 IVGVNKMDSTEPPYSEPRFEEIKKE 508
IV VNKMD +S+ R++EI+++
Sbjct: 243 IVVVNKMDDPTVNWSKERYDEIEQK 267
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/86 (40%), Positives = 56/86 (65%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D +
Sbjct: 99 KRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNE 158
Query: 183 AERERGITIDIALWKFETSKYYVTSL 260
ER +G T+++ FET T L
Sbjct: 159 EERLKGKTVEVGRAHFETESTRFTIL 184
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 517 YIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKG 627
++K GYN V F+PISG G NM + + PW+ G
Sbjct: 271 FLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 94.3 bits (224), Expect = 7e-20
Identities = 40/85 (47%), Positives = 61/85 (71%)
Frame = +3
Query: 6 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 185
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 186 ERERGITIDIALWKFETSKYYVTSL 260
ERERGIT+ +A+ F + +++V L
Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLL 322
Score = 91.1 bits (216), Expect = 6e-19
Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQ 430
L+D+PGH+DF+ NMI G +QAD A+L++ A G FEAG GQTREHA + GV+Q
Sbjct: 321 LLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQ 380
Query: 431 LIVGVNKMDSTEPPYSEPRFEEIKK 505
+IV +NKMD YS+ RF+ IK+
Sbjct: 381 VIVAINKMDIV--GYSKERFDLIKQ 403
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH D++KNMITG +Q D A+L+V+ G QT+EH LLA +GV ++
Sbjct: 147 VDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMV 199
Query: 437 VGVNKMDSTE 466
V +NK D +
Sbjct: 200 VFLNKEDQVD 209
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K H+NI IGHVD GK+T T L I +K+++ +D
Sbjct: 77 KPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE---------------IDAAP 121
Query: 183 AERERGITIDIALWKFET-SKYY 248
ER RGITI+ A ++ET +++Y
Sbjct: 122 EERARGITINTATVEYETENRHY 144
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 61.7 bits (143), Expect = 4e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH D++KNMITG +Q D +L+V+ G QT+EH LLA +GV L+
Sbjct: 135 VDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLV 187
Query: 437 VGVNKMDSTEPP 472
+NK+D + P
Sbjct: 188 CFLNKVDVVDDP 199
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/80 (35%), Positives = 38/80 (47%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K H+N+ IGHVD GK+T T + K E GK +DK
Sbjct: 65 KPHVNVGTIGHVDHGKTTLTAAI---------------TKVLAEEGKAKAIAFDEIDKAP 109
Query: 183 AERERGITIDIALWKFETSK 242
E++RGITI A ++ET+K
Sbjct: 110 EEKKRGITIATAHVEYETAK 129
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 215 CSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 394
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 395 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
H + +K +I+ NK+D + + E I+K +T+
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITNTN 214
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/103 (27%), Positives = 47/103 (45%)
Frame = +2
Query: 215 CSLEVRN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 394
C + +R V C +D PGH + M+ G + D A+L++AA QT E
Sbjct: 121 CKMTLRR-HVSC--VDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAE 171
Query: 395 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
H + +K +I+ NK+D + + E I+K +T+
Sbjct: 172 HLASVDMMRLKHIIILQNKIDLINEKAATEQHEAIQKFITNTN 214
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A+LI+AA QT EH + +K +I
Sbjct: 124 VDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHLKDII 177
Query: 437 VGVNKMDSTEPPYSEPRFEEIKKEYPHTS 523
+ NK+D + + + E+I++ +T+
Sbjct: 178 IIQNKIDLIQENEAIKQHEDIQRFITNTN 206
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLI 436
+D PGH + M+ G + D A+L++AA QT EH + +K +I
Sbjct: 126 VDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSEHLAAVEIMQLKHII 179
Query: 437 VGVNKMDSTEPPYSEPRFEEIKK 505
+ NK+D + + + E I+K
Sbjct: 180 ILQNKIDLIQENVAINQHEAIQK 202
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.043
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PGH +F M AD AVLIV A G
Sbjct: 205 RSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 34.7 bits (76), Expect = 0.057
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +3
Query: 3 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 182
K + NI ++ H+D+GK+TTT ++Y G + E+ +G+ W ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGR---------NYKIGEVHEGTATMDW----ME 140
Query: 183 AERERGITIDIA 218
E+ERGITI A
Sbjct: 141 QEQERGITITSA 152
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 195 RGITIDIA 218
+GITI A
Sbjct: 117 KGITIQSA 124
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI + H+DSGK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 195 RGITIDIA 218
+GITI A
Sbjct: 117 KGITIQSA 124
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGG 89
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
LID+PGH DF + T +D A+++V A G
Sbjct: 78 LIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 31.5 bits (68), Expect = 0.53
Identities = 20/70 (28%), Positives = 30/70 (42%)
Frame = +2
Query: 248 CYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
C +D PGH F G D A+++VAA G QT E A+
Sbjct: 554 CVFLDTPGHEAFGAMRARGARVTDIAIIVVAADDG-------IRPQTNE-AIAHAKAAAV 605
Query: 428 QLIVGVNKMD 457
+++ +NK+D
Sbjct: 606 PIVIAINKID 615
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.70
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
N +I H+D GKST L+ G + R + K F LD + ERE
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131
Query: 195 RGITIDI 215
RGITI +
Sbjct: 132 RGITIKL 138
Score = 28.3 bits (60), Expect = 4.9
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
LID PGH DF + + + A+L+V A G EA QT + LA + ++
Sbjct: 156 LIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA------QTLANVYLALENNL-EI 207
Query: 434 IVGVNKMD--STEPPYSEPRFEEI 499
I +NK+D EP EE+
Sbjct: 208 IPVLNKIDLPGAEPEKVLREIEEV 231
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 31.1 bits (67), Expect = 0.70
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +2
Query: 251 YLIDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 427
+ I GH D+ + T Q +C + L+V TG F +KNG R+ LG +
Sbjct: 224 FTIKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAE 283
Query: 428 QLIVGVNKMDSTE 466
+ +DS E
Sbjct: 284 LENLSTFTLDSDE 296
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 230 RN*QVLCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
R+ LC ++D PG+ +F M AD AV IV A G
Sbjct: 191 RSKSYLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQG 231
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/65 (38%), Positives = 31/65 (47%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
N +I H+D GKST L+ G I K G G +Y LDKL +RE
Sbjct: 68 NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY---LDKL--QRE 109
Query: 195 RGITI 209
RGIT+
Sbjct: 110 RGITV 114
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/88 (30%), Positives = 40/88 (45%)
Frame = +2
Query: 245 LCYLIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 424
L LID PGH DF + S A+L+V A G QT + LAF +
Sbjct: 136 LLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG-------VQAQTVANFYLAFEANL 188
Query: 425 KQLIVGVNKMDSTEPPYSEPRFEEIKKE 508
++ +NK+D P ++P E +K +
Sbjct: 189 -TIVPVINKIDQ---PTADP--ERVKAQ 210
>At4g20430.1 68417.m02981 subtilase family protein contains Pfam
profile: PF00082 subtilase family
Length = 856
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = -2
Query: 430 LFDTEGESEQGMLTGLTVLRDTSFEFTGTGSYDEHSAISLRGSCDHVLDEISVSRSINEV 251
+FDT E L G+ F +TGT ++ IS GS D L I+VS+ N
Sbjct: 714 IFDTSFEDYMSFLCGINGSAPVVFNYTGTNCLRNNATIS--GS-DLNLPSITVSKLNNTR 770
Query: 250 T*YLLVSN 227
T L++N
Sbjct: 771 TVQRLMTN 778
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 257 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 352
+D PGH F + G + D VL+VAA G
Sbjct: 273 LDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G+S D A+L+V + + G+ QT E +L + +
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756
Query: 434 IVGVNKMD 457
I+ +NK+D
Sbjct: 757 IIALNKVD 764
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIV 337
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIV 337
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCG 86
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129
Query: 195 RGITIDIALWKFETSKYYVTSLMLLDT 275
RGITI L K + Y T + ++DT
Sbjct: 130 RGITI---LSKNTSITYKNTKVNIIDT 153
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/87 (29%), Positives = 41/87 (47%)
Frame = +3
Query: 15 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 194
NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE
Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128
Query: 195 RGITIDIALWKFETSKYYVTSLMLLDT 275
RGITI L K + Y T + ++DT
Sbjct: 129 RGITI---LSKNTSITYKNTKVNIIDT 152
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +2
Query: 254 LIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 433
+ID PGH F G++ D A+L+V + G+ QT E L VK
Sbjct: 560 VIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK-F 611
Query: 434 IVGVNKMD 457
I+ +NK+D
Sbjct: 612 IIALNKVD 619
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 528 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 629
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At4g03000.2 68417.m00408 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 240 KYYVTSLMLLDTEISSRT*SQEPLRLIAL 326
KYY+ ++ LDTEIS + L++ AL
Sbjct: 684 KYYIENIKRLDTEISKLKLKSDSLKIAAL 712
>At4g03000.1 68417.m00407 expressed protein contains similarity to
hypothetical proteins
Length = 814
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 240 KYYVTSLMLLDTEISSRT*SQEPLRLIAL 326
KYY+ ++ LDTEIS + L++ AL
Sbjct: 684 KYYIENIKRLDTEISKLKLKSDSLKIAAL 712
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,152,723
Number of Sequences: 28952
Number of extensions: 325765
Number of successful extensions: 1040
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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