Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0660
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    24   1.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   2.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   2.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   4.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.4  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 250 PGWWHEIE 273
           P WWHE+E
Sbjct: 93  PNWWHELE 100


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 457 IWVLATDYENYALLYSCATSTANTDE 534
           +W++    E Y L+Y+CA++    ++
Sbjct: 294 VWLMDEVVEIYLLVYACASTCEQAND 319


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = +1

Query: 457 IWVLATDYENYALLYSCATSTANTDE 534
           +W++    E Y L+Y+CA++    ++
Sbjct: 294 VWLMDEVVEIYLLVYACASTCEQAND 319


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 281 QLRVTQGSVSAHSTQHQETNT 343
           QLRV+ G VS    ++QET +
Sbjct: 79  QLRVSHGCVSKILNRYQETGS 99


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = -2

Query: 229 LNTSDGFTLSSKYR 188
           L+TS+G+TLS K R
Sbjct: 173 LDTSEGYTLSVKPR 186


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 297 RGVYQLTVHSIRKPIPSCRH 356
           +GVYQ+     R  +P+ RH
Sbjct: 363 KGVYQVNPTKTRTNLPTHRH 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,509
Number of Sequences: 336
Number of extensions: 3723
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)