Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0660
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical prote...    30   0.082
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.3  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   3.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   4.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   4.1  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   9.4  
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    23   9.4  

>AJ438610-2|CAD27474.1|   92|Anopheles gambiae hypothetical protein
           protein.
          Length = 92

 Score = 29.9 bits (64), Expect = 0.082
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -2

Query: 325 LCTVS*YTPLRYPQLGTAQFHATNQVPLDIEVLNTSD 215
           LC    Y P+R P L TA   A+  +P +  VL+ +D
Sbjct: 21  LCRSIDYEPVRVPPLATASLTASLSIPAECIVLSVAD 57


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +3

Query: 99   PRVYWKTTINLPAKAKTP---AFMYP-HSILPHPLYLEDNVKPSLVFR 230
            P+  WK   NL    KT    A ++  H   P PLY+ D +  +L F+
Sbjct: 1177 PKKSWKMISNLSGGEKTLSSLALVFALHYYKPSPLYVMDEIDAALDFK 1224


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -3

Query: 474  SSQHPNVFNSPIGQSPSKPSVTSGCYGTGGNS 379
            S QHP+  +   G   SKP    G  G GG S
Sbjct: 1397 SYQHPHPHHHHNGSGRSKPPGPEGVGGGGGKS 1428


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 25  QLETQ*DHVVEHSSKQRHERGHNEHPGST 111
           Q + Q  H  +H  +Q+H++ ++ HP  T
Sbjct: 305 QQQQQQHHHHQHQPQQQHQQQYHSHPHHT 333


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 210  SHCPLNTGGEVGLSVGT*KQVSSLWLVD 127
            SHC ++ GG + L+VG     S L LV+
Sbjct: 1104 SHCGVSGGGSISLAVGN-SDSSQLSLVN 1130


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -3

Query: 210  SHCPLNTGGEVGLSVGT*KQVSSLWLVD 127
            SHC ++ GG + L+VG     S L LV+
Sbjct: 1102 SHCGVSGGGSISLAVGN-SDSSQLSLVN 1128


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 58  HSSKQRHERGHNEHPGSTGRLLSIYQ 135
           HS+ Q H     +H GS   L +IYQ
Sbjct: 32  HSTIQHHAAPAIQHVGSVHALPAIYQ 57


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 58  HSSKQRHERGHNEHPGSTGRLLSIYQ 135
           HS+ Q H R   +H GS     +IYQ
Sbjct: 32  HSTIQHHARPAIQHVGSIHAAPAIYQ 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 766,932
Number of Sequences: 2352
Number of extensions: 15751
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)