Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0660
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M16696-1|AAA51764.1| 189|Homo sapiens APOD protein. 41 0.004
J02611-1|AAB59517.1| 189|Homo sapiens APOD protein. 41 0.004
CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein. 41 0.004
CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein. 41 0.004
BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein. 41 0.004
BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein. 41 0.004
BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein. 41 0.004
S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein. 39 0.015
AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens ... 33 1.0
X02824-1|CAB46489.1| 70|Homo sapiens protein ( Human gene frag... 31 3.1
X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for ... 31 3.1
BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein... 31 3.1
AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein... 31 3.1
AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein... 31 3.1
M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein. 30 7.1
>M16696-1|AAA51764.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>J02611-1|AAB59517.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>CR541773-1|CAG46572.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>CR456838-1|CAG33119.1| 189|Homo sapiens APOD protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>BT019861-1|AAV38664.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>BT019860-1|AAV38663.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>BC007402-1|AAH07402.1| 189|Homo sapiens apolipoprotein D protein.
Length = 189
Score = 41.1 bits (92), Expect = 0.004
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +1
Query: 253 GWWHEIERYPTEGNAGECISSQYTASGNQY-----QXXXXXXXXXXXXXXXXXXXXXXXX 417
G W+EIE+ PT G CI + Y+ N Q
Sbjct: 44 GRWYEIEKIPTTFENGRCIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPA 103
Query: 418 RLRRTLANGRVE-DIWVLATDYENYALLYSC 507
+L + W+LATDYENYAL+YSC
Sbjct: 104 KLEVKFSWFMPSAPYWILATDYENYALVYSC 134
>S80440-1|AAB35919.1| 98|Homo sapiens apolipoprotein D protein.
Length = 98
Score = 39.1 bits (87), Expect = 0.015
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +1
Query: 460 WVLATDYENYALLYSC 507
W+LATDYENYAL+YSC
Sbjct: 28 WILATDYENYALVYSC 43
>AK124784-1|BAC85948.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ42794 fis, clone BRAWH3007783. ).
Length = 218
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/54 (33%), Positives = 21/54 (38%)
Frame = +1
Query: 13 QKSRQLETQ*DHVVEHSSKQRHERGHNEHPGSTGRLLSIYQPKRRHLLLCTHTQ 174
Q Q T H H Q H R H + G T L IY +H CT+ Q
Sbjct: 143 QAHTQAHTCTHHTGTHRQTQLHTRSHTDTHGHTYMYLHIYTHAHKHHSTCTNMQ 196
>X02824-1|CAB46489.1| 70|Homo sapiens protein ( Human gene
fragment for retinol binding protein (RBP) (exon 5). ).
Length = 70
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 451 EDIWVLATDYENYALLYSC 507
+D W++ TDY+ YA+ YSC
Sbjct: 1 DDHWIVDTDYDTYAVQYSC 19
>X00129-1|CAA24959.1| 199|Homo sapiens protein ( Human mRNA for
retinol binding protein (RBP). ).
Length = 199
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 451 EDIWVLATDYENYALLYSC 507
+D W++ TDY+ YA+ YSC
Sbjct: 118 DDHWIVDTDYDTYAVQYSC 136
>BC020633-1|AAH20633.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 451 EDIWVLATDYENYALLYSC 507
+D W++ TDY+ YA+ YSC
Sbjct: 120 DDHWIVDTDYDTYAVQYSC 138
>AL356214-6|CAH72329.1| 199|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 199
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 451 EDIWVLATDYENYALLYSC 507
+D W++ TDY+ YA+ YSC
Sbjct: 118 DDHWIVDTDYDTYAVQYSC 136
>AL356214-5|CAH72328.1| 201|Homo sapiens retinol binding protein 4,
plasma protein.
Length = 201
Score = 31.5 bits (68), Expect = 3.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 451 EDIWVLATDYENYALLYSC 507
+D W++ TDY+ YA+ YSC
Sbjct: 120 DDHWIVDTDYDTYAVQYSC 138
>M11437-2|AAB59550.1| 644|Homo sapiens kininogen protein.
Length = 644
Score = 30.3 bits (65), Expect = 7.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 28 LETQ*DHVVEHSSKQRHERGHNEH 99
LE Q HV++H K +H GH +H
Sbjct: 483 LEHQGGHVLDHGHKHKHGHGHGKH 506
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,648,601
Number of Sequences: 237096
Number of extensions: 2346616
Number of successful extensions: 6172
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6172
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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