Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0659
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   8.7  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   8.7  

>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 193 LKLGSATGPKTSNVVTG*TQLYDYSVTYTY 282
           + + S TG +  NVVT   Q +DY+ T+ Y
Sbjct: 174 IAINSTTGKR--NVVTPIVQSFDYNNTWVY 201


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +3

Query: 120 CNKFYKCTFGQPVEMVCYGNLYF 188
           C  F  C+       + YG L+F
Sbjct: 114 CRNFSTCSSHPTAAFISYGTLFF 136


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/23 (30%), Positives = 10/23 (43%)
 Frame = +3

Query: 120 CNKFYKCTFGQPVEMVCYGNLYF 188
           C  F  C+       + YG L+F
Sbjct: 113 CRNFSTCSSHPTAAFISYGTLFF 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,571
Number of Sequences: 438
Number of extensions: 1868
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)