Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0658
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    26   0.37 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           26   0.37 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.65 
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   4.6  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 17/73 (23%), Positives = 31/73 (42%)
 Frame = +2

Query: 281 NATGVSHFDELGYLFNMEYITGEITPEDKTMIDRMTTMWTNFAKYSNPTPETSELLPIKW 460
           N  GV H D+   + +  ++    T  D  M   +   W +F   +N  P  + +   + 
Sbjct: 458 NKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFV--NNGVPNVNSVQWPRL 515

Query: 461 EPVTKQKLNYLKI 499
            P  ++ L+YL I
Sbjct: 516 NP-NEKSLHYLHI 527


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 17/73 (23%), Positives = 31/73 (42%)
 Frame = +2

Query: 281 NATGVSHFDELGYLFNMEYITGEITPEDKTMIDRMTTMWTNFAKYSNPTPETSELLPIKW 460
           N  GV H D+   + +  ++    T  D  M   +   W +F   +N  P  + +   + 
Sbjct: 458 NKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFV--NNGVPNVNSVQWPRL 515

Query: 461 EPVTKQKLNYLKI 499
            P  ++ L+YL I
Sbjct: 516 NP-NEKSLHYLHI 527


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +2

Query: 326 NMEYITGEITPEDKTMIDRMTTMWTNFAKYSNPTPETSELLPIK 457
           NM+    E+ P DK+ + +  T WT F      T      L IK
Sbjct: 472 NMQISPNELKPNDKSQVIKQNT-WTVFRDAITQTGTGPAFLTIK 514


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 332 EYITGEITPEDKTMIDRMTTMWTNFAKYSN 421
           +YI  E+  ++K++ +    +  NF KY N
Sbjct: 152 QYIPPELPNDEKSLFENGVEIGINFDKYDN 181


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 165 IHPIQRTINKFLKNGAGDIFYYM 233
           ++P +  I    K+  G++FYYM
Sbjct: 215 VYPFEGDIRIVNKDRRGELFYYM 237


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +1

Query: 505 RVSLGNR--PLNHRMAFWDLFYKMNEEKQTY 591
           R+  G R  P N    FW   ++ NEE++ Y
Sbjct: 152 RIVNGTRQPPNNWLSVFWGSAWQWNEERKQY 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,381
Number of Sequences: 438
Number of extensions: 3483
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)