Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0657
(693 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0689 - 30937621-30937665,30938143-30938208,30938303-309383... 142 2e-34
06_01_0981 + 7613381-7614086,7614203-7614282,7614883-7614960,761... 89 2e-18
04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403 67 1e-11
02_04_0557 + 23865202-23865437,23865469-23865997 36 0.023
01_06_1737 - 39559321-39559461,39559761-39559817,39559919-395601... 33 0.28
11_06_0578 + 25176304-25176388,25176503-25177032,25177267-251779... 31 0.87
10_05_0031 + 8356046-8356361,8356439-8356648,8356735-8357043,835... 30 2.0
07_03_0699 + 20772415-20773450,20789050-20789606,20790971-207915... 29 2.6
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 29 3.5
10_08_0712 + 20075931-20076263,20076378-20076761 29 3.5
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 29 3.5
09_02_0117 + 4434214-4434239,4434717-4435071 28 6.1
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 28 6.1
05_01_0214 - 1615519-1616775 28 6.1
02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038 28 6.1
11_07_0003 - 27182551-27183054 28 8.1
11_03_0003 - 8865721-8865802,8866707-8866747 28 8.1
09_02_0278 + 6691685-6692188 28 8.1
04_04_0090 - 22747049-22747282,22747438-22747847,22748562-227487... 28 8.1
03_05_0147 - 21268081-21268596 28 8.1
03_02_0894 + 12226006-12226484,12226601-12226709 28 8.1
03_01_0526 + 3956909-3957071,3957262-3957317,3957398-3957462,395... 28 8.1
02_04_0654 - 24755339-24755408,24755488-24755624,24756243-247563... 28 8.1
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 8.1
>02_05_0689 -
30937621-30937665,30938143-30938208,30938303-30938356,
30938489-30938560,30938648-30938743,30939883-30939960,
30940485-30940564,30940662-30941343
Length = 390
Score = 142 bits (345), Expect = 2e-34
Identities = 91/230 (39%), Positives = 121/230 (52%), Gaps = 5/230 (2%)
Frame = +1
Query: 19 PATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVGMRAAMR 198
P+ T T + L + ++++RR+E A+ +LYK K+IRGFCHLY GQEAVAVGM AA+
Sbjct: 49 PSRDVTTTPAELLTFFRDMSVMRRMEIAADSLYKAKLIRGFCHLYDGQEAVAVGMEAAIT 108
Query: 199 DADSVITAYRCHGWTYLM---GLVCWGCSRS*RGAGPVAPGAREVPCICTDATSMVATGL 369
+DS+ITAYR H TYL LV R AG + DA G+
Sbjct: 109 RSDSIITAYRDH-CTYLARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGI 167
Query: 370 LVRR--SRWELEWPSPTSTAPTGSHXXXXXXXXXQPGSTLRSLQHV*TRDLPCVFVCENN 543
+ + L + T + Q G +L LP + VCENN
Sbjct: 168 VGAQVPLGCGLAFAQKYRKEETATFALYGDGAANQ-GQLFEALNISALWKLPAILVCENN 226
Query: 544 GYGMGTSVDRSSASTEYYTRGDYVPGVWVDGMDVLATREAARFAIEYCNA 693
YGMGT+ R++ S YY RGDYVPG+ VDGMDVLA ++A +FA E+ A
Sbjct: 227 HYGMGTAEWRAAKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKEHAIA 276
Score = 88.6 bits (210), Expect = 4e-18
Identities = 40/64 (62%), Positives = 49/64 (76%), Gaps = 2/64 (3%)
Frame = +3
Query: 243 LSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVAFAHK 416
L+ G ++ +EL GR+ GCSRGKGGSMH Y + NFYGG+GIVGAQVPLG G+AFA K
Sbjct: 124 LARGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQK 183
Query: 417 YRAD 428
YR +
Sbjct: 184 YRKE 187
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2
Query: 383 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLFEAYNMSKL 508
P+G + + TFALYGDGAANQGQLFEA N+S L
Sbjct: 173 PLGCGLAFAQKYRKEETATFALYGDGAANQGQLFEALNISAL 214
>06_01_0981 +
7613381-7614086,7614203-7614282,7614883-7614960,
7615166-7615261,7615370-7615441,7615676-7615729,
7615819-7615884,7616291-7616335
Length = 398
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/64 (64%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Frame = +3
Query: 243 LSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGR--NFYGGNGIVGAQVPLGAGVAFAHK 416
L+ G + + +EL GRR GCSRGKGGSMHLY + NFYGG+GIVGAQVPLG G+AFA +
Sbjct: 132 LARGGDLAALFAELMGRRGGCSRGKGGSMHLYKKDANFYGGHGIVGAQVPLGCGLAFAQR 191
Query: 417 YRAD 428
YR +
Sbjct: 192 YRKE 195
Score = 85.4 bits (202), Expect = 4e-17
Identities = 41/78 (52%), Positives = 53/78 (67%)
Frame = +1
Query: 1 HKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVG 180
H +D P AT T+ + + ++ +RR E A+ +LYK K+IRGFCHLY GQEAVAVG
Sbjct: 52 HIVDPPPREVAT-TARELATFFRDMSAMRRAEIAADSLYKAKLIRGFCHLYDGQEAVAVG 110
Query: 181 MRAAMRDADSVITAYRCH 234
M AA AD++ITAYR H
Sbjct: 111 MEAATTRADAIITAYRDH 128
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/57 (63%), Positives = 44/57 (77%)
Frame = +1
Query: 514 LPCVFVCENNGYGMGTSVDRSSASTEYYTRGDYVPGVWVDGMDVLATREAARFAIEY 684
LP V VCENN YGMGT+ R+S S YY RGDYVPG+ VDGMDVLA ++A +FA ++
Sbjct: 225 LPVVLVCENNHYGMGTAEWRASKSPAYYKRGDYVPGLKVDGMDVLAVKQACKFAKQH 281
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +2
Query: 383 PVGSWSGLRPQVPRRRGVTFALYGDGAANQGQLFEAYNMSKL 508
P+G + + VTF LYGDGAANQGQLFEA NM+ L
Sbjct: 181 PLGCGLAFAQRYRKEAAVTFDLYGDGAANQGQLFEALNMAAL 222
>04_01_0110 + 1123238-1123450,1124211-1124997,1126126-1126403
Length = 425
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +3
Query: 189 SDARCRLSNHRVSLSRMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYG--RNFYGGN 362
+ A C +S +R + LS GV V++EL G+ TGC RG+GGSMH++ N GG
Sbjct: 126 NQADCVVSTYRDHVHA--LSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGF 183
Query: 363 GIVGAQVPLGAGVAFAHKYR 422
+G +P+ G AFA KYR
Sbjct: 184 AFIGEGIPVATGAAFAAKYR 203
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/78 (37%), Positives = 43/78 (55%)
Frame = +1
Query: 1 HKLDQGPATSATLTSEDALKLYEQLTILRRIETASGNLYKEKIIRGFCHLYSGQEAVAVG 180
+K A + +T E+AL+LYE + + R E +Y + GF HLY+GQEAV+ G
Sbjct: 61 NKAAPAAAAHSAVTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTG 120
Query: 181 MRAAMRDADSVITAYRCH 234
+ AD V++ YR H
Sbjct: 121 FIKLLNQADCVVSTYRDH 138
Score = 54.8 bits (126), Expect = 6e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = +1
Query: 514 LPCVFVCENNGYGMGTSVDRSSASTEYYTRGDY--VPGVWVDGMDVLATREAARFAIE 681
LP VFV ENN + +G S R+++ E Y +G +PGV VDGMDVL RE A+ AIE
Sbjct: 244 LPIVFVVENNLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIE 301
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 404 LRPQVPRRRGVTFALYGDGAANQGQLFEAYNMSKL 508
L+ P VT A +GDG N GQ FE NM++L
Sbjct: 207 LKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQL 241
>02_04_0557 + 23865202-23865437,23865469-23865997
Length = 254
Score = 36.3 bits (80), Expect = 0.023
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Frame = +3
Query: 156 RTRSRGSRYESSDARCR-LSNHRVSLSRMDLSHGVSVL-GVLSELTGRRTGCSRGKGGSM 329
RTR+RG + RCR L V++ S +V G+ + GRR R +GG
Sbjct: 81 RTRARGGD-DHCRRRCRVLVATAVAMFLYGASRNAAVRRGLAAAALGRRGRRGRRRGGGR 139
Query: 330 HLYGRNFYG----GNGIVGAQ--VPLGA---GVAFAHKYRADGESRSLCTETEPP 467
GRN YG G+G+ A L A G+A ADGES +L T PP
Sbjct: 140 ---GRNVYGCAVLGSGLFSAASVASLAASACGIAAYVYVEADGESLTLTPTTPPP 191
>01_06_1737 -
39559321-39559461,39559761-39559817,39559919-39560117,
39560217-39560344,39560443-39560548,39560721-39560800,
39561189-39561286,39561368-39561481,39561567-39561707,
39561801-39561885,39562761-39563099
Length = 495
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 300 GCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYRADGESRSLCTETEPPTRV- 476
G G GG + YG++ +GG G GA P G A Y+ T+PP R
Sbjct: 32 GGGGGGGGGGYPYGQDAHGG-GYYGAPAPQGGYAAPYPAYQQPPPPMPSPAATQPPARAG 90
Query: 477 NSSKP 491
+SKP
Sbjct: 91 GASKP 95
>11_06_0578 +
25176304-25176388,25176503-25177032,25177267-25177997,
25178122-25178172,25178562-25178813,25178894-25179004,
25179102-25179183,25179460-25179489
Length = 623
Score = 31.1 bits (67), Expect = 0.87
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 445 SERDSPSARYLWAKATPAPNGTCAPTIPLPP*KLR--PYKCMEPPLPREQPVL 293
S S AR A A P+P +P P P LR P++ PP P +QP L
Sbjct: 352 STPSSSQARKASAPAPPSPPEPPSPRHPASPPLLRSLPHQPTPPPSPSQQPTL 404
>10_05_0031 +
8356046-8356361,8356439-8356648,8356735-8357043,
8357225-8357347,8357428-8357502,8357597-8357687,
8357775-8357866,8357890-8358020
Length = 448
Score = 29.9 bits (64), Expect = 2.0
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = -2
Query: 431 PVGAVLVGEGHSSSQRDLRTNNPV-ATIEVASVQMHGTSLAPGA-TGPAPRQLREHPQHT 258
P G+ E SS D N+ V A ++V S + HG A GA G P L HP+ T
Sbjct: 299 PRGSPTYAESGDSSSSDGEANDDVDAVVDVGSEEDHGEPTARGAPVGEQPAPL--HPKST 356
>07_03_0699 +
20772415-20773450,20789050-20789606,20790971-20791567,
20792258-20792413
Length = 781
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 382 SRWELEWPSPTSTAPTGSHXXXXXXXXXQPGSTLRSLQ 495
+RWEL P T+TAPT S +P + +RSL+
Sbjct: 740 TRWELGAPVDTATAPTISPSTLDLVTGRRPTAVVRSLR 777
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 329 HGTSLAPGATGP-APRQLREHPQHTNPMR*VHP 234
HGTS + + P RQL EHP++ M HP
Sbjct: 311 HGTSASSSSQHPYMARQLLEHPEYNPRMHRTHP 343
>10_08_0712 + 20075931-20076263,20076378-20076761
Length = 238
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 282 LTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAH 413
L G CS+GKG F+GG+ + V LG GV+F H
Sbjct: 142 LEGGLKECSKGKGC--------FFGGDSVGYVDVVLGGGVSFVH 177
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 390 PTGPAHQQSRCHHRSCVRTNAWNLPCPG 307
PT P+ + SRC S R +A LP PG
Sbjct: 64 PTSPSKEVSRCQSFSADRPHAHPLPIPG 91
>09_02_0117 + 4434214-4434239,4434717-4435071
Length = 126
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +3
Query: 156 RTRSRGSRYESSDARCRLSNHRVSLSRMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHL 335
R + + + + RC H + + G + L V E G G RGKGG + +
Sbjct: 46 RVKDKDAGEDPGGERCWEEQHETEVDVVHGEAGDAALAVKGEARGGGGGIYRGKGGGVEV 105
Query: 336 Y 338
+
Sbjct: 106 W 106
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = -3
Query: 433 SPSARYLWAKATPAPNGTCAPTIPLPP*KLR---PYKCMEPPLPREQPV 296
+PS+ A PAP P P P + P +PPLP QPV
Sbjct: 482 TPSSSQAMTAAAPAPPSPPEPPSPRHPPRQPTPPPSPSQQPPLPTPQPV 530
>05_01_0214 - 1615519-1616775
Length = 418
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 160 QEAVAVGMRAAMRDADSVITAYRCHGWTYLMGLVCWGC 273
+E A + +RD D V+ + H W +G V C
Sbjct: 344 REIDATSLENGLRDMDGVVAVHELHIWAITVGKVLLAC 381
>02_05_1154 + 34506915-34507467,34508334-34508388,34508933-34509038
Length = 237
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 406 KATPAPNGTCAPTIPLPP*KLRPYKCMEPPLP 311
+A P G C +P P + R +C PP P
Sbjct: 56 RAPPTVPGCCTQVVPAQPQRRRFPRCFTPPAP 87
>11_07_0003 - 27182551-27183054
Length = 167
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/93 (29%), Positives = 37/93 (39%)
Frame = +3
Query: 165 SRGSRYESSDARCRLSNHRVSLSRMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGR 344
S GS S R + + S R + G S GV S T R G G ++ G
Sbjct: 48 SSGSSSGGSSTRSPVGSASPSSGRNPATTG-SPGGVRSPATARAGSPGGGTGTTLAGAGS 106
Query: 345 NFYGGNGIVGAQVPLGAGVAFAHKYRADGESRS 443
G + + G +P GAG + + D SRS
Sbjct: 107 PGGGRSPVGGGTIPAGAGNQGSGSWSGDYGSRS 139
>11_03_0003 - 8865721-8865802,8866707-8866747
Length = 40
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 367 IPLPP*KLRPYKCMEPPLPRE 305
+PLP K++P+ C PP+P+E
Sbjct: 19 VPLPM-KVKPFDCALPPVPKE 38
>09_02_0278 + 6691685-6692188
Length = 167
Score = 27.9 bits (59), Expect = 8.1
Identities = 27/93 (29%), Positives = 37/93 (39%)
Frame = +3
Query: 165 SRGSRYESSDARCRLSNHRVSLSRMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGR 344
S GS S R + + S R + G S GV S T R G G ++ G
Sbjct: 48 SSGSSSGGSSTRSPVGSASPSSGRNPATTG-SPGGVRSPATARAGSPGGGTGTTLAGAGS 106
Query: 345 NFYGGNGIVGAQVPLGAGVAFAHKYRADGESRS 443
G + + G +P GAG + + D SRS
Sbjct: 107 PGGGRSPVGGGTIPAGAGNQGSGSWSGDYGSRS 139
>04_04_0090 -
22747049-22747282,22747438-22747847,22748562-22748757,
22749511-22749583,22749673-22749753,22749855-22749940,
22750050-22750126,22750313-22750409,22751025-22752020,
22752882-22752926
Length = 764
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Frame = +3
Query: 279 ELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGV-----AFAHKYRADGESRS 443
E+ +R R K G G GG G +G +VP G GV ++K+ D +S+S
Sbjct: 296 EVKHKRKQDKRKKKGKKGGGGSGGGGGGGSIGEEVPKGGGVRERLKGASYKHARDIDSKS 355
Query: 444 L 446
+
Sbjct: 356 I 356
>03_05_0147 - 21268081-21268596
Length = 171
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +3
Query: 234 RMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFA 410
R + G + LGV + RR + G GG + GG G GA PLG+GV A
Sbjct: 54 RGSAARGGARLGVAT--VARRRNAAGGSGGGPVAGSSTWQGGGGSGGA--PLGSGVPAA 108
>03_02_0894 + 12226006-12226484,12226601-12226709
Length = 195
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 364 GLLVRRSRWELEWPSPTSTAP 426
GLL RRSRW + PS AP
Sbjct: 30 GLLQRRSRWAVRAPSTAQQAP 50
>03_01_0526 +
3956909-3957071,3957262-3957317,3957398-3957462,
3957560-3958006,3958102-3958227,3958328-3958511,
3958788-3958943
Length = 398
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 315 KGGSMHLYGRNFYGGNGIVGAQVPLGAGVAFAHKYRADGESRSLCTETEPPTRVNSSKP 491
+ G+ +L R G+GI P A +++ D E++ T PP +S+P
Sbjct: 95 RDGNNNLKRRGAVAGSGIAATFTPPKPKAAAKKRFQDDSENQDPALATPPPPPPAASRP 153
>02_04_0654 -
24755339-24755408,24755488-24755624,24756243-24756326,
24756929-24756944,24758035-24758405
Length = 225
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -3
Query: 466 GGSVSVQSERDSPSARYLWAKATPAPNGTCAPTI---PLPP*KLRPYKCMEPPLPREQP 299
GG++ + ERD PS+ +A P P P + P PP P + ++P P P
Sbjct: 13 GGTLGKRKERDRPSSEE--QRAPPPPPPPLFPAMSARPQPPRPAHPARFVKPMPPPPPP 69
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 228 LSRMDLSHGVSVLGVLSELTGRRTGCSRGKGGSMHLYGRNFYGGNGIVG 374
++R + V V+ V++ G SRG G +HL G GG G
Sbjct: 23 VARRSTTAAVVVVAVIAVTGGMAASDSRGSGRRLHLVGAASSGGGSETG 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,045,218
Number of Sequences: 37544
Number of extensions: 432455
Number of successful extensions: 1674
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1667
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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