Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0657
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    28   0.32 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    24   4.0  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    24   5.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   6.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.9  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 460 SVSVQSERDSPSARYLWAKATPAPNGTCAPTIPLPP*KLRPYKCMEPPLPREQP 299
           +VS Q +R  P+       A+PAP  + AP +P       P +  +PP  R  P
Sbjct: 67  AVSSQLQRPQPTV----LAASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAP 116


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -2

Query: 413 VGEGHSSSQRDLRTNNPVATIEVASVQMHGTSLAP 309
           +G+ HSSS+   R++   +     S  MH  S AP
Sbjct: 232 IGKNHSSSKNMPRSSTSKSISSANSFPMHVVSSAP 266


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = -1

Query: 372 QQSRCHHRSCVRTNAWN--LPCP 310
           + SRC HR C +   ++   PCP
Sbjct: 17  EASRCVHRRCPKNEVYSCCAPCP 39


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 466 GGSVSVQSERDSPSARYLWAKATPAPNGTCAPTIPLPP 353
           GG+  V     SP++ +   ++  +P G C   I  PP
Sbjct: 845 GGTTPVPVSLLSPASSHYSQRSARSPYGGCGSGIASPP 882


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = +3

Query: 150 VFRTRSRGSRYESSDARCR-LSNHRVSLSR 236
           V R+RSRGSR  S  ++ R  S  R S SR
Sbjct: 428 VSRSRSRGSRSRSRTSQSRSRSKTRTSRSR 457


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 691,701
Number of Sequences: 2352
Number of extensions: 13987
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)