Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0656
         (687 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    25   1.7  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   6.8  

>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = -3

Query: 412 FQQ*LAIYNAAPMILYIVSIKIISNI----HQLPCVHIQSLP 299
           F    A+ N    + ++ +IK++  I    H+L CV+I  +P
Sbjct: 140 FMNVCAVLNQEHQLCHLANIKLVVGIDEDTHELECVNISDVP 181


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/19 (47%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +2

Query: 167  LFFTN-YCWCEFIILKLVL 220
            ++FTN +CW +FII+ + L
Sbjct: 1365 VYFTNAWCWLDFIIVMVSL 1383


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 533  AFSRLFLRQFPANLKTYFE 477
            AF+   + QFP+ +K YFE
Sbjct: 1048 AFNNQTIEQFPSLVKKYFE 1066


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,885
Number of Sequences: 2352
Number of extensions: 10929
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)