Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0656
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537433-1|CAD97675.1|  167|Homo sapiens hypothetical protein pr...    32   1.7  
BC067825-1|AAH67825.1|  735|Homo sapiens muskelin 1, intracellul...    32   1.7  
BC002834-1|AAH02834.2|  549|Homo sapiens MKLN1 protein protein.        32   1.7  
AL162071-1|CAB82407.1|  416|Homo sapiens hypothetical protein pr...    32   1.7  
AK002024-1|BAA92042.1|  528|Homo sapiens protein ( Homo sapiens ...    32   1.7  
AF047489-1|AAF06698.1|  735|Homo sapiens muskelin protein.             32   1.7  

>BX537433-1|CAD97675.1|  167|Homo sapiens hypothetical protein
           protein.
          Length = 167

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 15  NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 44


>BC067825-1|AAH67825.1|  735|Homo sapiens muskelin 1, intracellular
           mediator containing kelch motifs protein.
          Length = 735

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 543 NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 572


>BC002834-1|AAH02834.2|  549|Homo sapiens MKLN1 protein protein.
          Length = 549

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 357 NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 386


>AL162071-1|CAB82407.1|  416|Homo sapiens hypothetical protein
           protein.
          Length = 416

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 224 NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 253


>AK002024-1|BAA92042.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11162 fis, clone PLACE1007105. ).
          Length = 528

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 336 NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 365


>AF047489-1|AAF06698.1|  735|Homo sapiens muskelin protein.
          Length = 735

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = +2

Query: 335 DIRNNLYTYD-VQNHWSCVVNSELLLEDSP 421
           ++RN+ + YD V+N WSCV  ++   +D+P
Sbjct: 543 NVRNSFWIYDIVRNSWSCVYKNDQAAKDNP 572


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,968,729
Number of Sequences: 237096
Number of extensions: 1468711
Number of successful extensions: 1944
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)