Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0654
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0607 + 19168164-19168358,19168594-19168716,19168791-191689...    29   3.5  
02_04_0035 + 19078267-19078479,19078588-19078674,19079792-190798...    29   3.5  
05_03_0281 + 11560402-11560569,11561373-11561579,11562966-115631...    29   4.7  
03_02_0272 - 7034043-7034800,7034884-7034923                           29   4.7  
02_05_0867 - 32338313-32338331,32338372-32338496,32338972-323391...    28   6.2  
02_05_0523 - 29755007-29755856,29756381-29756940,29757058-297572...    28   8.1  

>10_08_0607 +
           19168164-19168358,19168594-19168716,19168791-19168946,
           19169129-19169314,19169467-19169583,19169721-19169774,
           19169854-19169925,19170430-19170535,19170658-19170754,
           19171090-19171184,19172318-19172420,19172699-19172886,
           19174928-19175183,19177187-19177325
          Length = 628

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 37  SVQFQFGRTGCCISPLSSGKPSGQ*TVVAVCQLYYDFFV 153
           ++ FQ+G      SPL + K +G+  V    Q   DFF+
Sbjct: 275 AIGFQYGSPDAVCSPLINAKKTGRSLVETYAQYVQDFFI 313


>02_04_0035 +
           19078267-19078479,19078588-19078674,19079792-19079863,
           19080338-19080526,19080599-19080718,19081348-19081430,
           19081518-19081773,19081878-19082199,19086355-19086548,
           19087135-19087227,19089327-19089497,19089580-19089699,
           19090303-19090373,19090608-19090675,19091097-19091191
          Length = 717

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = -1

Query: 349 IQQLIDRIDERWPDPRCIISIQDSSRRRLRLHFSGEVS 236
           ++Q++DRID  W D R + ++++  RR  R   + E S
Sbjct: 600 LEQVVDRIDTLWED-RLLAALRELDRRAERFQRASEFS 636


>05_03_0281 +
           11560402-11560569,11561373-11561579,11562966-11563174,
           11563261-11563309,11563611-11563673,11563799-11565472
          Length = 789

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/62 (30%), Positives = 35/62 (56%)
 Frame = -1

Query: 223 SVEVSSDSFTVIVYREDGAASEGERRSHNRVDRQQQRFTDLRASPMKEVKYNIPFSQIET 44
           S++ +SD  T I  +E G   +G+ +SH+         T+  A+P K++K ++  S ++T
Sbjct: 601 SLQENSDGLT-ITSKEGGRKKKGKGKSHD--------VTETSAAPAKDMKDSLADSFLDT 651

Query: 43  VR 38
           VR
Sbjct: 652 VR 653


>03_02_0272 - 7034043-7034800,7034884-7034923
          Length = 265

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 557 QDFYDVSIVRIENFRVGVQPWRDGSRAIM*GIGWFEFLAAIPAMCP 420
           +DFYDVS+V  + + VG+     G+R      G+   +  + A+CP
Sbjct: 128 KDFYDVSLV--DGYNVGIGVAATGARVNRSTCGYAGCVGDVNALCP 171


>02_05_0867 -
           32338313-32338331,32338372-32338496,32338972-32339186,
           32340043-32340086,32340187-32340548,32341357-32341650
          Length = 352

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 291 RSRTPVDGDYVYTSAAR*AGMTKALKFPATVSP 193
           RSR  +   ++YTS+A  +  T A +FP+ VSP
Sbjct: 6   RSRESLLPSFLYTSSAARSFATGATRFPSPVSP 38


>02_05_0523 -
           29755007-29755856,29756381-29756940,29757058-29757275,
           29757941-29758067
          Length = 584

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 668 RMGAGIVQASALTATAGGIKVEISQRIVITNQP 570
           RMG G+V   A    AG ++VE  +R+   +QP
Sbjct: 422 RMGVGLVVGMAAMVVAGVVEVERLKRVGAPDQP 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,322,634
Number of Sequences: 37544
Number of extensions: 397690
Number of successful extensions: 1223
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)