Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0652
(714 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33) 95 7e-20
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06) 84 9e-17
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 9e-17
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027) 31 0.70
SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6) 31 0.70
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2) 31 0.93
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08) 30 1.6
SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77) 29 3.7
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058) 29 4.9
SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2) 28 6.5
SB_35074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
Length = 991
Score = 94.7 bits (225), Expect = 7e-20
Identities = 40/80 (50%), Positives = 55/80 (68%)
Frame = +1
Query: 268 KKPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDND 447
+KP V + HGL + +WVL P L YILA+ G+DVWLGN RG YS AH+K + D+
Sbjct: 150 RKPVVFLQHGLLMDSTNWVLNSPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDS- 208
Query: 448 SEFWKFSWEEIGTRDLPAMI 507
S+FW ++W+++ DLPAMI
Sbjct: 209 SKFWDWTWQQMAQYDLPAMI 228
Score = 48.4 bits (110), Expect = 6e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 152 LIKKYRYPVEVHKVVTEDGYILEMQRIPHGRDQ 250
LI+ YPVE H V T DG+IL +QRIPHGR++
Sbjct: 111 LIRNRGYPVEEHYVTTSDGFILNLQRIPHGRNE 143
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +3
Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
+Y A D TL + + ++ Y+GHSQGT + + S E KI A APV Y
Sbjct: 221 QYDLPAMIDYVTLATS-QSQVFYVGHSQGTLIGFTGFSANQELAKKIKMFFALAPV-YTV 278
Query: 660 FNANRLLKLIA 692
+ + +K A
Sbjct: 279 AHVSEFIKASA 289
>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
Length = 226
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +1
Query: 271 KPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDS 450
KP V + HGL SA +WV +ILA+ +DVWLGN RG Y + H+KL D+D+
Sbjct: 18 KPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA 77
Query: 451 EFWKFSWEEIGTRDLPAMI 507
FW FS++E+ DLPAMI
Sbjct: 78 -FWDFSFDEMAKYDLPAMI 95
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
+Y A D T K G+ L+Y GHSQGT + + + P K+ A A APV+ +
Sbjct: 88 KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 146
Query: 660 FNANRLLKLIAPHANSIE 713
+ LK +A + IE
Sbjct: 147 -HMGGALKYLAYLSPEIE 163
>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 84.2 bits (199), Expect = 9e-17
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +1
Query: 271 KPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDS 450
KP V + HGL SA +WV +ILA+ +DVWLGN RG Y + H+KL D+D+
Sbjct: 341 KPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA 400
Query: 451 EFWKFSWEEIGTRDLPAMI 507
FW FS++E+ DLPAMI
Sbjct: 401 -FWDFSFDEMAKYDLPAMI 418
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +2
Query: 137 LDIVGLIKKYRYPVEVHKVVTEDGYILEMQRIPHGRD 247
+++ LI+ YPVE + V TEDGYIL +QRIP+GR+
Sbjct: 296 MNVTQLIQYNGYPVEDYDVTTEDGYILSVQRIPYGRE 332
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
+Y A D T K G+ L+Y GHSQGT + + + P K+ A A APV+ +
Sbjct: 411 KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 469
Query: 660 FNANRLLKLIAPHANSIE 713
+ LK +A + IE
Sbjct: 470 -HMGGALKYLAYLSPEIE 486
>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
+Y A D T K G+ L+Y GHSQGT + + + P K+ A A APV+ +
Sbjct: 7 KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 65
Query: 660 FNANRLLKLIAPHANSIE 713
+ LK +A + IE
Sbjct: 66 -HMGGALKYLAYLSPEIE 82
>SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)
Length = 299
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 259 PDPKKPAVLVMHGLFASAADW 321
PDP P + +MHGLF + +W
Sbjct: 64 PDPPDPPLFIMHGLFGNKKNW 84
>SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
Length = 203
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 26 VNQATARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVEVHKVVTED 205
V ++ RR P AD +YR +++ + D++ DIVG I YR E + T+D
Sbjct: 6 VGRSVYRREPEADVGSSVYRRESEAGVGGSVYRRDSVADIVGGI--YRRESEANVGATDD 63
>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
Length = 265
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 510 YTLKVAGKRRLHYIGHSQGT 569
Y L+ G+ +L YIGHSQGT
Sbjct: 4 YVLQTTGQSQLFYIGHSQGT 23
>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
Length = 416
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = -2
Query: 365 SAKMYAKPTPGPIKTQSAAEANSPCITKTAG 273
S K+ +P PGP++ +S++ + SP ++ T G
Sbjct: 187 SEKLKPQPRPGPLRKRSSSSSRSPVLSVTDG 217
>SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 125 EDALLDIVGLIKKYRYPVEVHKVVTEDG 208
ED+L D + L++KY +P V+ + T+ G
Sbjct: 164 EDSLSDAIDLLRKYGFPTNVYPLGTKRG 191
>SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77)
Length = 673
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 384 AWKCTWYILLQSSH*IRPGQRLRVLEIQLGRNRYPRSACYDCYTLKVAGKRRL 542
+WK T + + I P ++ +++ GR + ++ C DC +L+ KRRL
Sbjct: 254 SWKQTLKTAVDRHNAINPSSIVKEDDVEEGRFAWSQTECQDCVSLRT--KRRL 304
>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
Length = 1002
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +2
Query: 41 ARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVE-VHKVVTEDGYI 214
+R S +DY + Y+ ++ G +T A I GL+K+ P E + V D Y+
Sbjct: 223 SRLSNTSDYEQHTYKANSPGPETERTMTFYASARIDGLVKREETPEEMIETYVDRDDYL 281
>SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)
Length = 322
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 125 EDALLDIVGLIKKYRYPVEVHKV 193
ED+L D + L++KY +P V+++
Sbjct: 124 EDSLSDAIDLLRKYGFPTNVYRI 146
>SB_35074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 413 PELTLN*TRTTTQSFGNSVGKK*VPEICLL*LLHFESCWKKTTSLYWSLTRNYCLLGYGI 592
P LT+N TR+ Q ++ ++CL + + +CW LY L+ YG
Sbjct: 210 PSLTIN-TRSNVQKTMALFSRRKATKLCLTVTIIYATCWLPILVLYIVSFHRPELVAYGS 268
Query: 593 F 595
F
Sbjct: 269 F 269
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 21 YVLIRRPLGVLHMRTTSRNCTGWTPKVP 104
+V RP+ VL T + NC W P VP
Sbjct: 233 HVKNERPIAVLCGHTRTVNCVTWNPLVP 260
>SB_45306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1576
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 91 RPRCPLFYQCN*RCFARYC 147
RPRC + Y N +CFA +C
Sbjct: 1298 RPRCDIAYMENNKCFAVHC 1316
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,108,959
Number of Sequences: 59808
Number of extensions: 514332
Number of successful extensions: 1220
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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