Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0651
         (837 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)        95   8e-20
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)        84   1e-16
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)              84   1e-16
SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)              44   1e-04
SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)         31   0.88 
SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)                 31   0.88 
SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)               31   1.2  
SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)                  30   2.0  
SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.7  
SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77)             29   4.7  
SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)               29   6.2  
SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)             28   8.2  
SB_35074| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.2  
SB_20323| Best HMM Match : EMI (HMM E-Value=3.8)                       28   8.2  

>SB_21051| Best HMM Match : Abhydro_lipase (HMM E-Value=1.8e-33)
          Length = 991

 Score = 94.7 bits (225), Expect = 8e-20
 Identities = 40/80 (50%), Positives = 55/80 (68%)
 Frame = +1

Query: 268 KKPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDND 447
           +KP V + HGL   + +WVL  P   L YILA+ G+DVWLGN RG  YS AH+K + D+ 
Sbjct: 150 RKPVVFLQHGLLMDSTNWVLNSPHDSLGYILADKGFDVWLGNIRGNEYSAAHVKWNKDS- 208

Query: 448 SEFWKFSWEEIGTRDLPAMI 507
           S+FW ++W+++   DLPAMI
Sbjct: 209 SKFWDWTWQQMAQYDLPAMI 228



 Score = 48.4 bits (110), Expect = 7e-06
 Identities = 20/33 (60%), Positives = 25/33 (75%)
 Frame = +2

Query: 152 LIKKYRYPVEVHKVVTEDGYILEMQRIPHGRDQ 250
           LI+   YPVE H V T DG+IL +QRIPHGR++
Sbjct: 111 LIRNRGYPVEEHYVTTSDGFILNLQRIPHGRNE 143



 Score = 32.7 bits (71), Expect = 0.38
 Identities = 23/71 (32%), Positives = 34/71 (47%)
 Frame = +3

Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
           +Y   A  D  TL  + + ++ Y+GHSQGT + +   S   E   KI    A APV Y  
Sbjct: 221 QYDLPAMIDYVTLATS-QSQVFYVGHSQGTLIGFTGFSANQELAKKIKMFFALAPV-YTV 278

Query: 660 FNANRLLKLIA 692
            + +  +K  A
Sbjct: 279 AHVSEFIKASA 289


>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
          Length = 226

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 38/79 (48%), Positives = 50/79 (63%)
 Frame = +1

Query: 271 KPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDS 450
           KP V + HGL  SA +WV         +ILA+  +DVWLGN RG  Y + H+KL  D+D+
Sbjct: 18  KPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA 77

Query: 451 EFWKFSWEEIGTRDLPAMI 507
            FW FS++E+   DLPAMI
Sbjct: 78  -FWDFSFDEMAKYDLPAMI 95



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 45/94 (47%)
 Frame = +3

Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
           +Y   A  D  T K  G+  L+Y GHSQGT + +   +  P    K+ A  A APV+ + 
Sbjct: 88  KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 146

Query: 660 FNANRLLKLIAPHANSIEALTSLIGINELFGRSD 761
            +    LK +A  +  IE L  ++G+ +     D
Sbjct: 147 -HMGGALKYLAYLSPEIEFLFKVLGVRDFLPTDD 179


>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score = 84.2 bits (199), Expect = 1e-16
 Identities = 38/79 (48%), Positives = 50/79 (63%)
 Frame = +1

Query: 271 KPAVLVMHGLFASAADWVLMGPGVGLAYILAEAGYDVWLGNARGTYYSRAHIKLDPDNDS 450
           KP V + HGL  SA +WV         +ILA+  +DVWLGN RG  Y + H+KL  D+D+
Sbjct: 341 KPVVFLQHGLLCSATNWVTNLYNESFGFILADQCFDVWLGNVRGNTYGKRHVKLPVDSDA 400

Query: 451 EFWKFSWEEIGTRDLPAMI 507
            FW FS++E+   DLPAMI
Sbjct: 401 -FWDFSFDEMAKYDLPAMI 418



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +2

Query: 137 LDIVGLIKKYRYPVEVHKVVTEDGYILEMQRIPHGRD 247
           +++  LI+   YPVE + V TEDGYIL +QRIP+GR+
Sbjct: 296 MNVTQLIQYNGYPVEDYDVTTEDGYILSVQRIPYGRE 332



 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 45/94 (47%)
 Frame = +3

Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
           +Y   A  D  T K  G+  L+Y GHSQGT + +   +  P    K+ A  A APV+ + 
Sbjct: 411 KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 469

Query: 660 FNANRLLKLIAPHANSIEALTSLIGINELFGRSD 761
            +    LK +A  +  IE L  ++G+ +     D
Sbjct: 470 -HMGGALKYLAYLSPEIEFLFKVLGVRDFLPTDD 502


>SB_25531| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 29/94 (30%), Positives = 45/94 (47%)
 Frame = +3

Query: 480 RYPRSACYDCYTLKVAGKRRLHYIGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLE 659
           +Y   A  D  T K  G+  L+Y GHSQGT + +   +  P    K+ A  A APV+ + 
Sbjct: 7   KYDLPAMIDFVT-KTTGQASLYYAGHSQGTMIGFIAFAHNPAVIQKVKAFYALAPVSTVS 65

Query: 660 FNANRLLKLIAPHANSIEALTSLIGINELFGRSD 761
            +    LK +A  +  IE L  ++G+ +     D
Sbjct: 66  -HMGGALKYLAYLSPEIEFLFKVLGVRDFLPTDD 98


>SB_44624| Best HMM Match : Abhydrolase_1 (HMM E-Value=0.00027)
          Length = 299

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 259 PDPKKPAVLVMHGLFASAADW 321
           PDP  P + +MHGLF +  +W
Sbjct: 64  PDPPDPPLFIMHGLFGNKKNW 84


>SB_18547| Best HMM Match : Vicilin_N (HMM E-Value=1.6)
          Length = 203

 Score = 31.5 bits (68), Expect = 0.88
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = +2

Query: 26  VNQATARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVEVHKVVTED 205
           V ++  RR P AD    +YR +++     +    D++ DIVG I  YR   E +   T+D
Sbjct: 6   VGRSVYRREPEADVGSSVYRRESEAGVGGSVYRRDSVADIVGGI--YRRESEANVGATDD 63


>SB_39520| Best HMM Match : Abhydrolase_1 (HMM E-Value=2)
          Length = 265

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 510 YTLKVAGKRRLHYIGHSQGT 569
           Y L+  G+ +L YIGHSQGT
Sbjct: 4   YVLQTTGQSQLFYIGHSQGT 23


>SB_7173| Best HMM Match : dDENN (HMM E-Value=1.5e-08)
          Length = 416

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = -2

Query: 365 SAKMYAKPTPGPIKTQSAAEANSPCITKTAG 273
           S K+  +P PGP++ +S++ + SP ++ T G
Sbjct: 187 SEKLKPQPRPGPLRKRSSSSSRSPVLSVTDG 217


>SB_33099| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 698

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 125 EDALLDIVGLIKKYRYPVEVHKVVTEDG 208
           ED+L D + L++KY +P  V+ + T+ G
Sbjct: 164 EDSLSDAIDLLRKYGFPTNVYPLGTKRG 191


>SB_25485| Best HMM Match : ICln_channel (HMM E-Value=0.77)
          Length = 673

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = +3

Query: 384 AWKCTWYILLQSSH*IRPGQRLRVLEIQLGRNRYPRSACYDCYTLKVAGKRRL 542
           +WK T    +   + I P   ++  +++ GR  + ++ C DC +L+   KRRL
Sbjct: 254 SWKQTLKTAVDRHNAINPSSIVKEDDVEEGRFAWSQTECQDCVSLRT--KRRL 304


>SB_3000| Best HMM Match : Extensin_2 (HMM E-Value=0.058)
          Length = 1002

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +2

Query: 41  ARRSPHADYVEELYRLDAQGARYSTNVTEDALLDIVGLIKKYRYPVE-VHKVVTEDGYI 214
           +R S  +DY +  Y+ ++ G      +T  A   I GL+K+   P E +   V  D Y+
Sbjct: 223 SRLSNTSDYEQHTYKANSPGPETERTMTFYASARIDGLVKREETPEEMIETYVDRDDYL 281


>SB_37380| Best HMM Match : THF_DHG_CYH_C (HMM E-Value=5.2)
          Length = 322

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 9/23 (39%), Positives = 17/23 (73%)
 Frame = +2

Query: 125 EDALLDIVGLIKKYRYPVEVHKV 193
           ED+L D + L++KY +P  V+++
Sbjct: 124 EDSLSDAIDLLRKYGFPTNVYRI 146


>SB_35074| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 518

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/61 (27%), Positives = 27/61 (44%)
 Frame = +2

Query: 413 PELTLN*TRTTTQSFGNSVGKK*VPEICLL*LLHFESCWKKTTSLYWSLTRNYCLLGYGI 592
           P LT+N TR+  Q       ++   ++CL   + + +CW     LY        L+ YG 
Sbjct: 210 PSLTIN-TRSNVQKTMALFSRRKATKLCLTVTIIYATCWLPILVLYIVSFHRPELVAYGS 268

Query: 593 F 595
           F
Sbjct: 269 F 269


>SB_20323| Best HMM Match : EMI (HMM E-Value=3.8)
          Length = 234

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +3

Query: 549 IGHSQGTTVFWAMGSLRPEYNSKIIAMQAYAPVAYLEFNANRLLKLIAPHANSIEALTSL 728
           + H +G    W +   RP +    I +Q     + L    N L  L+ PHA  I ++  +
Sbjct: 19  VDHPRGLFSDWCLFHSRPSHCLSKIGLQQPCTHSTLATRLNHLRLLLYPHAREIGSVFEI 78

Query: 729 I 731
           I
Sbjct: 79  I 79


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,221,461
Number of Sequences: 59808
Number of extensions: 603797
Number of successful extensions: 1423
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1420
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)