Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0649
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75549-9|CAA99914.1|  357|Caenorhabditis elegans Hypothetical pr...    28   5.5  
M38249-1|AAA28060.1|  357|Caenorhabditis elegans G protein alpha...    28   5.5  
AY008124-1|AAG32077.1|  357|Caenorhabditis elegans heterotrimeri...    28   5.5  
U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical pr...    27   9.5  
U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z75549-9|CAA99914.1|  357|Caenorhabditis elegans Hypothetical
           protein T19C4.6 protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 474 LELFKTKIHHYYKINTLVIFYRQNVDFKVDTAITR 370
           ++LFK  I++ Y +NT VI +   +D   +  +T+
Sbjct: 248 IQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTK 282


>M38249-1|AAA28060.1|  357|Caenorhabditis elegans G protein alpha
           subunit protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 474 LELFKTKIHHYYKINTLVIFYRQNVDFKVDTAITR 370
           ++LFK  I++ Y +NT VI +   +D   +  +T+
Sbjct: 248 IQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTK 282


>AY008124-1|AAG32077.1|  357|Caenorhabditis elegans heterotrimeric G
           protein alphasubunit protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 474 LELFKTKIHHYYKINTLVIFYRQNVDFKVDTAITR 370
           ++LFK  I++ Y +NT VI +   +D   +  +T+
Sbjct: 248 IQLFKQVINNKYFVNTSVILFLNKIDLFEEKIVTK 282


>U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical
           protein K05F1.6b protein.
          Length = 627

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 543 QAYRYYTYGMIFNKFTRLNLLCDLELFKTKIHHYYKINTLV 421
           QAY +    M+    T  NL+CD    K   H +Y I  L+
Sbjct: 100 QAYHFEKDVMVETIVTDFNLVCDSWFAKGHAHMFYSIGYLL 140


>U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical
           protein K05F1.6a protein.
          Length = 773

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 543 QAYRYYTYGMIFNKFTRLNLLCDLELFKTKIHHYYKINTLV 421
           QAY +    M+    T  NL+CD    K   H +Y I  L+
Sbjct: 246 QAYHFEKDVMVETIVTDFNLVCDSWFAKGHAHMFYSIGYLL 286


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,656,122
Number of Sequences: 27780
Number of extensions: 215798
Number of successful extensions: 345
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)