Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0649
(577 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 5.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 5.0
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 6.6
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.6
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.6
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.6
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.6
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 492 LNLLCDLELFKTKIHHYYK 436
L LLC + F +H +YK
Sbjct: 230 LPLLCPAQGFPVPVHRWYK 248
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 68 RCNYTETLELIPQDGW 115
RCN T I DGW
Sbjct: 363 RCNATGAFSWIGSDGW 378
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = +3
Query: 234 FTVYNKYN*HFSNYDDLL 287
++ YN YN +++NY+ L
Sbjct: 91 YSNYNNYNNNYNNYNKKL 108
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 85 LSNNYNYNNYNNNYKPL 101
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 85 LSNNYNYNNYNNNYKPL 101
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 85 LSNNYNYNNYNNNYKPL 101
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 85 LSNNYNYNNYNNNYKPL 101
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 318 LSNNYNYNNYNNNYKPL 334
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 318 LSNNYNYNNYNNNYKPL 334
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 318 LSNNYNYNNYNNNYKPL 334
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 318 LSNNYNYNNYNNNYKPL 334
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 318 LSNNYNYNNYNNNYKPL 334
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.6
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -3
Query: 92 LRSQYNYNGYTTHDTPI 42
L + YNYN Y + P+
Sbjct: 307 LSNNYNYNNYNNNYKPL 323
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 234 FTVYNKYN*HFSNYDD 281
++ YN YN +++NY++
Sbjct: 324 YSNYNNYNNNYNNYNN 339
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 6.6
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = -1
Query: 178 LTAHLFVKWLLEPKDI 131
L H+ +W++EP D+
Sbjct: 700 LVVHVPPRWIVEPTDV 715
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,748
Number of Sequences: 438
Number of extensions: 2812
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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