Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0647
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.4  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   1.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   1.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   7.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   9.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    20   9.6  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 26  SKDNTKCLSTSNSNRSPIRLGTGR 97
           +KD  K     N N+ P++ G GR
Sbjct: 478 AKDLEKQRQQCNQNKCPVKRGNGR 501


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 189 CGERQVEGMERSQRHLPRRCQEQYIENAEKLHSK 290
           C E+  EG+ +  RHL +     + E  EK   K
Sbjct: 74  CNEKHKEGVRKVIRHLIKNKPSWWQELQEKYDPK 107


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 128 SARFSSSLGLVFQFLTLSATCLNC 57
           +ARF+   G  ++F  ++A  LNC
Sbjct: 269 TARFTVEQGYRYRFRVINAGFLNC 292


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 189 CGERQVEGMERSQRHLPRRCQEQYIENAEK 278
           C E Q  G ++  RHL    ++ + E  EK
Sbjct: 78  CSETQKNGSKKIMRHLIDHKRDWWNELEEK 107


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 32   DNTKCLSTSNSNRSPIRLGTGRPSPVTMRTLR 127
            +NT+C   ++S  +P         PVT  T R
Sbjct: 2280 ENTECHPDASSTMAPSTTPMVPDKPVTTTTSR 2311


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = -2

Query: 232 CLCDRSMPSTWR 197
           C C+   P+ WR
Sbjct: 876 CKCENGKPTCWR 887



 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 212 HGTVAKASPKTM 247
           +GT+AK SPK +
Sbjct: 481 NGTLAKLSPKVL 492


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = -1

Query: 305 NNLCVFGVEFLRIFDVLFLASSWEMP 228
           N      ++FLR F    L   WE P
Sbjct: 617 NQFVYDAIDFLREFQFNGLDVDWEYP 642


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 146 CLYREYSARFSSSLGLVFQFLTLSATCL 63
           C+Y  YSA    ++ L+F  + +   C+
Sbjct: 211 CIYYFYSAFIIFTIHLLFYCVLIILLCI 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,660
Number of Sequences: 336
Number of extensions: 2184
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)