Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0647
(380 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0417 - 3692247-3692329,3692442-3692504,3693233-3693350,369... 66 1e-11
03_05_0107 - 20883353-20883627,20883739-20883801,20884608-208847... 66 1e-11
06_01_0108 - 860080-860162,860276-860338,860857-860974,861481-86... 58 3e-09
03_06_0582 - 34891613-34891795,34892407-34892466,34893134-348932... 43 9e-05
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 36 0.014
02_05_0421 + 28827856-28828009,28828453-28828529,28828642-288286... 32 0.18
04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455 29 1.6
01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841 29 1.6
11_06_0715 + 26552962-26553510,26553578-26555746 28 2.2
07_01_0703 - 5295561-5297523,5299344-5299462 28 2.2
01_06_1208 + 35424241-35424370,35424415-35424728,35424782-354249... 28 2.2
01_06_0273 + 28073759-28074387,28074885-28075428,28076240-28076401 28 2.9
03_01_0463 + 3551764-3551897,3551989-3552046,3552148-3552255,355... 27 3.8
02_05_0612 + 30348495-30348995,30349679-30350023 27 3.8
08_02_0818 - 21524539-21524664,21524911-21524961,21525800-215261... 27 5.0
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 27 5.0
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 27 5.0
01_03_0003 + 11509530-11512772 27 5.0
03_06_0051 + 31290431-31290610,31290727-31290849,31291771-312919... 27 6.6
01_07_0064 + 40834649-40834786,40834934-40834997,40835333-408353... 27 6.6
10_08_0931 - 21647562-21649037 26 8.7
09_04_0689 - 19480409-19480599,19480780-19480889,19481032-194811... 26 8.7
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 26 8.7
04_03_0507 + 16638385-16638466,16638823-16638978,16639220-166392... 26 8.7
01_05_0163 - 18773962-18774297 26 8.7
>08_01_0417 -
3692247-3692329,3692442-3692504,3693233-3693350,
3694084-3694095
Length = 91
Score = 65.7 bits (153), Expect = 1e-11
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 43 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 216
M L E F+Q A+K + S++ L LY LYKQAT+GDVN A+P + AKW AW
Sbjct: 1 MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAW 60
Query: 217 NGRKGISQDDAKNN 258
+G S+++A ++
Sbjct: 61 KAVEGKSKEEAMSD 74
>03_05_0107 -
20883353-20883627,20883739-20883801,20884608-20884725,
20885012-20885023
Length = 155
Score = 65.7 bits (153), Expect = 1e-11
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Frame = +1
Query: 43 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLV--ESAKWKAW 216
M L E F++ A+KV+ S+++ L LY LYKQAT+GDVN ++P + AKW AW
Sbjct: 1 MGLQEDFEEYAEKVKTLPESTSNEDKLILYGLYKQATVGDVNTSRPGIFAQRDRAKWDAW 60
Query: 217 NGRKGISQDDAKNN 258
+G S+++A ++
Sbjct: 61 KAVEGKSKEEAMSD 74
>06_01_0108 -
860080-860162,860276-860338,860857-860974,861481-861492
Length = 91
Score = 57.6 bits (133), Expect = 3e-09
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +1
Query: 43 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 216
M L E+F++ A+K + S+++ L LY LYKQAT+G V +P L + KW AW
Sbjct: 1 MGLQEEFEEFAEKAKTLPDTISNEDKLLLYGLYKQATVGPVTTGRPGIFNLKDRYKWDAW 60
Query: 217 NGRKGISQDDA 249
+G S+++A
Sbjct: 61 KAVEGKSKEEA 71
>03_06_0582 -
34891613-34891795,34892407-34892466,34893134-34893280,
34893502-34893657,34893745-34893828,34893907-34893995,
34894575-34894689,34894776-34894899,34895080-34895219,
34895868-34895929,34896042-34896108,34896185-34896295,
34896868-34896945,34897074-34897274,34897492-34897563,
34897630-34897693,34898084-34898154,34898328-34898474
Length = 656
Score = 42.7 bits (96), Expect = 9e-05
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 109 DDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDAKNNTSKMRRNS 282
+D L LY LY+QAT+G N+ +P VE +KW +W+G + +A K+
Sbjct: 37 NDVALLLYGLYQQATVGPCNVPKPRAWNPVEQSKWTSWHGLGSMPSAEAMRLFVKILEEE 96
Query: 283 TP 288
P
Sbjct: 97 DP 98
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 35.5 bits (78), Expect = 0.014
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 97 TKPSDDENLALYSLYKQATIGDVNIAQPSG--LVESAKWKAWNGRKGISQDDA 249
T + L LY LYK AT G QPS L AKW AW+ + ++A
Sbjct: 109 TSVPEQAQLQLYGLYKIATEGPCTAPQPSALKLKARAKWNAWHKLGAMPTEEA 161
>02_05_0421 +
28827856-28828009,28828453-28828529,28828642-28828699,
28828834-28828909,28829659-28829728,28829828-28830247
Length = 284
Score = 31.9 bits (69), Expect = 0.18
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 194 RAPSGRHG-TVAKASPKTMPRTIHRKCGETPLQIRINYYLELNK 322
R HG + A A+P T+P + GETPL + Y +E+ +
Sbjct: 95 RGAFAAHGISFASAAPPTIPSAENNNAGETPLADALRYQIEVQR 138
>04_01_0396 + 5191653-5191874,5192281-5192396,5192891-5193455
Length = 300
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 2 LQLPYLLISKDNT-KCLSTSNSNRSPIRLGTGRPSP 106
L + +L+IS NT K L++ S+ SP +LG G P P
Sbjct: 120 LGIIFLIISLRNTNKGLTSLQSSSSPTKLGDGLPLP 155
>01_05_0573 + 23359968-23361044,23361112-23361255,23361458-23361841
Length = 534
Score = 28.7 bits (61), Expect = 1.6
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -1
Query: 227 LRPFHAFHLALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQFLTLSATCLNCSSR 48
LR + +A+ R L + + SP++ CL YS R L L L C+ C +
Sbjct: 230 LRELGLYCVAMEDRDLDFVLANSPVLECLGIYYSQRQIVLLRLASHSLRCVQICM-CIAE 288
Query: 47 DI 42
DI
Sbjct: 289 DI 290
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = -3
Query: 144 LVQGVQRKVLIVTGLGLP---VPNLIGDLFEL 58
LV G R + ++ +GLP +PN+IGDLF L
Sbjct: 560 LVAGKCRYMSVLELIGLPKDNIPNVIGDLFNL 591
>07_01_0703 - 5295561-5297523,5299344-5299462
Length = 693
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 140 YREYSARFSSSLGLVFQFLTLSAT--CLNCSSRDILCYLLRSGGR 12
+RE A+ + +G + Q L+ C NCS +L L +S GR
Sbjct: 454 FREDDAQLAEEIGDLVQLRVLNVVLNCSNCSEAKVLTELAKSMGR 498
>01_06_1208 +
35424241-35424370,35424415-35424728,35424782-35424967,
35425361-35425523,35425601-35425787,35425875-35426016
Length = 373
Score = 28.3 bits (60), Expect = 2.2
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Frame = +2
Query: 56 SNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSPAVLWRAPSGRHGTVAKAS 235
+ S+RSP+ T +RL + L PA + A G HG AS
Sbjct: 52 AGSSRSPVFSSLVEDDGETRHLQALDGADTRLRLFQMDLLDPASITPAVDGAHGVFHLAS 111
Query: 236 PKTMPRTIHRKCGETPL---QIRINYYL 310
P T+ T + +P Q+++ Y L
Sbjct: 112 PLTLHPTQDPEATNSPFTIAQLQLQYCL 139
>01_06_0273 + 28073759-28074387,28074885-28075428,28076240-28076401
Length = 444
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/48 (25%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 169 IAQPSGLVESAKWKAWNGRKGISQDDAKNNT-SKMRRNSTPNTHKLLL 309
+ +P G ++ K K W G+K + +D++ +++ S+M + +T ++L
Sbjct: 195 VPKPRGGEDAKKLKIWLGKKKVQEDESDSDSDSEMDDDEGADTKSIIL 242
>03_01_0463 +
3551764-3551897,3551989-3552046,3552148-3552255,
3552664-3552721,3552788-3553014,3553085-3553145,
3553311-3553615
Length = 316
Score = 27.5 bits (58), Expect = 3.8
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +1
Query: 10 TLPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 189
T+ PD + DE + A++ + KP+ + +SLY AT ++ +
Sbjct: 189 TVFPDAEARLSQPKDETWSDCAEQ--GFAVKPTKGSAVLFFSLYPNATFDPGSLHGSCPV 246
Query: 190 VESAKWKA 213
++ KW A
Sbjct: 247 IQGEKWSA 254
>02_05_0612 + 30348495-30348995,30349679-30350023
Length = 281
Score = 27.5 bits (58), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -2
Query: 292 YLEWSFSAFSMYCSWHRLGRCLCDRSM 212
Y EW + Y +WHR+ C+ D ++
Sbjct: 119 YSEWLRARIEDYETWHRIESCMADAAV 145
>08_02_0818 -
21524539-21524664,21524911-21524961,21525800-21526170,
21526497-21526852,21527926-21527996
Length = 324
Score = 27.1 bits (57), Expect = 5.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Frame = +1
Query: 70 VADKVRNWKTKP----SDDENLALYSLYKQAT 153
V D++ W P +D+EN + +LYK+AT
Sbjct: 241 VKDRIEEWYRPPWDRTADEENASFNALYKEAT 272
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 112 DENLALYSLYKQATIGDVNIAQPSGLVES 198
DE+ AL +L+ A + VNI QPS +VES
Sbjct: 476 DESSALDALHTLADLS-VNILQPSSIVES 503
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +1
Query: 91 WKTKPSDDENLALYSLYKQATIGDVNIAQ 177
WK S ++NLA +++Y T V++ Q
Sbjct: 138 WKVSRSSEQNLAFFAVYNMETTDIVSLYQ 166
>01_03_0003 + 11509530-11512772
Length = 1080
Score = 27.1 bits (57), Expect = 5.0
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Frame = +2
Query: 68 RSPIRLGTGRPSPV--TMRTLRCTPCTSRLP*VMLTLPSPAVLWRA-----PSGRHGTVA 226
R P+ G GR S + T R SRLP V L + A W G H
Sbjct: 307 RQPLDHG-GRGSCIVTTTRNQNVAQIMSRLPQVNLDGLNLAASWALFCHCIRQGCHSLKL 365
Query: 227 KASPKTMPRTIHRKCGETPLQIRI 298
+ +T+ R I KC PL IR+
Sbjct: 366 SGTLETIGRGIVEKCSGVPLTIRV 389
>03_06_0051 +
31290431-31290610,31290727-31290849,31291771-31291928,
31292395-31292497,31293077-31293172,31293367-31293432,
31293500-31293619,31293905-31293991
Length = 310
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +1
Query: 76 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 213
+K K KP + L YSL TI ++ +++ KW A
Sbjct: 254 EKCIGLKVKPRKGDGLLFYSLMVNGTIDPTSLHGSCPVIKGEKWVA 299
>01_07_0064 +
40834649-40834786,40834934-40834997,40835333-40835391,
40835602-40835677,40835775-40835846,40837641-40837728,
40838239-40838497,40838766-40839000,40839447-40839470,
40839910-40839997,40840110-40840300,40841082-40841322,
40841803-40842556
Length = 762
Score = 26.6 bits (56), Expect = 6.6
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 13 LPPDLKR*HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL 189
L P + K D FK+ D+V +W T D+ N+A Y + + P G+
Sbjct: 161 LSPRILEDFKAYADVCFKEFGDRVAHWIT--IDEPNVASIGSYDSGQLAPGRCSDPFGI 217
>10_08_0931 - 21647562-21649037
Length = 491
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 170 LPSPAVLWRAPSGRHGTVAKASPKTMPRTI 259
LPSP + WR+ SGR A + P P+ +
Sbjct: 214 LPSP-IPWRSRSGRFDASAPSPPSPSPKRL 242
>09_04_0689 -
19480409-19480599,19480780-19480889,19481032-19481117,
19481410-19481523,19481697-19482066,19482216-19482346,
19482628-19482736,19482901-19483022,19483113-19483219,
19483447-19483551,19483654-19483812,19484071-19484126,
19484200-19484251,19486724-19486821,19487086-19487210
Length = 644
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 90 VPNLIGDLFELLVERHFVLSF 28
VP G+ ++LL E+HFVL +
Sbjct: 447 VPVTAGNFYKLLAEKHFVLLY 467
>04_04_0200 -
23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 208 KAWNG--RKGISQDDAKNNTSKMRRNSTPNTHKL 303
+ W G R G+S++ A+ T K ++ TP T KL
Sbjct: 497 RQWVGSKRSGLSKNCAREVTDKASKSITPGTKKL 530
>04_03_0507 +
16638385-16638466,16638823-16638978,16639220-16639264,
16640033-16640112,16640573-16641076
Length = 288
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 226 KGISQDDAKNNTSKMRRNSTPNTHKLLLRIK*ISYLN 336
KG+ QDD+ NT ++ T + +++ + + LN
Sbjct: 90 KGLLQDDSSKNTKVIKNKGTTDCNQIATHVHQMQVLN 126
>01_05_0163 - 18773962-18774297
Length = 111
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = -2
Query: 265 SMYCSWHRLGRCLCDRSMPSTWRSPQDRWAGQC*HHLW*PACTGSTAQGSHRHWAW 98
S CSWHRL R DR +T + + +W P C +G W
Sbjct: 47 SRNCSWHRLVR---DRGAAATTMTAAADGGADDDNRVWWPRCRRRHTRGRCARRGW 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,285,004
Number of Sequences: 37544
Number of extensions: 254582
Number of successful extensions: 862
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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