Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0647
(380 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identic... 62 2e-10
At3g05420.2 68416.m00594 acyl-CoA binding family protein similar... 48 2e-06
At3g05420.1 68416.m00593 acyl-CoA binding family protein similar... 48 2e-06
At5g27630.1 68418.m03310 acyl-CoA binding family protein similar... 48 2e-06
At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / AC... 38 0.002
At1g51355.1 68414.m05776 expressed protein 36 0.009
At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2) iden... 36 0.012
At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / AC... 35 0.016
At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / AC... 35 0.016
At1g33250.1 68414.m04110 fringe-related protein + weak similarit... 31 0.20
At1g67880.1 68414.m07751 glycosyl transferase family 17 protein ... 31 0.34
At3g47700.1 68416.m05196 chromosome structural maintenance prote... 30 0.45
At1g55560.1 68414.m06359 multi-copper oxidase type I family prot... 29 1.4
At1g20600.1 68414.m02573 DNA-binding protein-related low similar... 29 1.4
At4g00300.1 68417.m00037 fringe-related protein + weak similarit... 28 1.8
At2g24010.1 68415.m02868 serine carboxypeptidase S10 family prot... 28 1.8
At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putativ... 28 2.4
At4g03170.1 68417.m00433 hypothetical protein 27 3.2
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 27 4.2
At3g13400.1 68416.m01685 multi-copper oxidase type I family prot... 27 4.2
At1g67300.2 68414.m07660 hexose transporter, putative similar to... 27 4.2
At1g67300.1 68414.m07659 hexose transporter, putative similar to... 27 4.2
At3g13390.1 68416.m01684 multi-copper oxidase type I family prot... 27 5.6
At1g60610.2 68414.m06823 expressed protein 27 5.6
At1g60610.1 68414.m06822 expressed protein 27 5.6
At1g16370.1 68414.m01958 transporter-related low similarity to o... 27 5.6
At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 7.4
At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam PF05... 26 7.4
At3g19550.1 68416.m02478 expressed protein 26 7.4
At3g01620.1 68416.m00093 glycosyl transferase family 17 protein ... 26 7.4
At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase fa... 26 7.4
At1g55570.1 68414.m06360 multi-copper oxidase type I family prot... 26 7.4
>At1g31812.1 68414.m03905 acyl-CoA binding protein / ACBP identical
to acyl-CoA-binding protein (ACBP) [Arabidopsis
thaliana] SWISS-PROT:P57752
Length = 92
Score = 61.7 bits (143), Expect = 2e-10
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 43 MSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPS--GLVESAKWKAW 216
M L E+F++ A+KV PS+++ L LY LYKQA G V+ ++P + E AKW AW
Sbjct: 1 MGLKEEFEEHAEKVNTLTELPSNEDLLILYGLYKQAKFGPVDTSRPGMFSMKERAKWDAW 60
Query: 217 NGRKGISQDDAKNN 258
+G S ++A N+
Sbjct: 61 KAVEGKSSEEAMND 74
>At3g05420.2 68416.m00594 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 669
Score = 48.4 bits (110), Expect = 2e-06
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 85 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 222
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQG 80
>At3g05420.1 68416.m00593 acyl-CoA binding family protein similar to
PIR|S68824|S68824 rngB protein, cytosolic (Dictyostelium
discoideum); contains Pfam profiles PF00887: Acyl CoA
binding protein, PF01344: Kelch motif
Length = 668
Score = 48.4 bits (110), Expect = 2e-06
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = +1
Query: 85 RNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 222
+N +K DD L LY+LY+QAT+G N +PS VE +KWK+W G
Sbjct: 33 KNVISKFPDDTALLLYALYQQATVGPCNTPKPSAWRPVEQSKWKSWQG 80
>At5g27630.1 68418.m03310 acyl-CoA binding family protein similar to
RING finger rngB protein, cytosolic - Dictyostelium
discoideum, PIR:S68824; contains Pfam profiles PF01344:
Kelch motif, PF00887: Acyl CoA binding protein (ACBP)
Length = 648
Score = 48.0 bits (109), Expect = 2e-06
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
Frame = +1
Query: 82 VRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNG 222
V+ +K S+D +L LY+L++QAT+G +I +PS VE +KWK+W G
Sbjct: 33 VKQLSSKFSNDTSLLLYTLHQQATLGPCSIPKPSAWNPVEQSKWKSWQG 81
>At5g53470.1 68418.m06645 acyl-CoA binding protein, putative / ACBP,
putative similar to acyl-CoA binding protein 2
[Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 338
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 100 KPSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDA 249
K S++ L LY LYK AT G QPS L AKW+AW + ++A
Sbjct: 116 KVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEA 167
>At1g51355.1 68414.m05776 expressed protein
Length = 116
Score = 35.9 bits (79), Expect = 0.009
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +2
Query: 35 NTKCLSTSNSNRSPIRLGTGRPSPVTMRTLRCTPCTSRLP*VMLTLPSP 181
N+ STS+++ SP T PSPV+ + CTP SR+P ++ P+P
Sbjct: 32 NSDVTSTSSTSTSPT--STATPSPVSAESGCCTPEKSRIPEMLTCPPAP 78
>At4g27780.1 68417.m03990 acyl-CoA binding protein 2 (ACBP2)
identical to acyl-CoA binding protein 2 [Arabidopsis
thaliana] gi|12039034|gb|AAG46057
Length = 354
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 103 PSDDENLALYSLYKQATIGDVNIAQPSGL--VESAKWKAWNGRKGISQDDA 249
PSD + LY LYK AT G QPS L AKW+AW + ++A
Sbjct: 128 PSDVQQ-QLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEA 177
>At4g24230.2 68417.m03478 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 362
Score = 35.1 bits (77), Expect = 0.016
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 112 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDA 249
+ + L+ L+K AT G AQP ++ SA KW AW +SQ++A
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEA 301
>At4g24230.1 68417.m03477 acyl-CoA binding protein, putative / ACBP,
putative contains similarity to acyl-CoA binding protein
2 [Arabidopsis thaliana] gi|12039034|gb|AAG46057
Length = 364
Score = 35.1 bits (77), Expect = 0.016
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 112 DENLALYSLYKQATIGDVNIAQPSGLVESA--KWKAWNGRKGISQDDA 249
+ + L+ L+K AT G AQP ++ SA KW AW +SQ++A
Sbjct: 254 EAKMELFGLHKIATEGSCREAQPMAVMISARAKWNAWQKLGNMSQEEA 301
>At1g33250.1 68414.m04110 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 548
Score = 31.5 bits (68), Expect = 0.20
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -2
Query: 274 SAFSMYCSWHRLGRCLCDRSMPSTWRSPQDRWAGQC 167
S F + +WH R LC R+ P+T P GQC
Sbjct: 501 SGFPLSKNWHLAPRRLCCRATPTTTNEPLRLTVGQC 536
>At1g67880.1 68414.m07751 glycosyl transferase family 17 protein low
similarity to beta-1,4-mannosyl-glycoprotein
beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
from Mus musculus [SP|Q10470], Rattus norvegicus
[SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
profile PF04724 :Glycosyltransferase family 17
Length = 390
Score = 30.7 bits (66), Expect = 0.34
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 323 IYLILSNNLCVFGVEFLRIFDVLFLASSWEMPLRPFH 213
++L++ +CV GV + FL WE P +PFH
Sbjct: 48 LFLLVIMPMCVLGVYINALKISYFLRPLWESPPKPFH 84
>At3g47700.1 68416.m05196 chromosome structural maintenance
protein-related contains weak similarity to
RAD50-interacting protein 1 [Homo sapiens]
gi|11967435|gb|AAG42101
Length = 795
Score = 30.3 bits (65), Expect = 0.45
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +1
Query: 40 KMSLDEQ---FKQVADKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAK 204
++ LDE+ FK+ D RNW K DE ++ ++Y+ I + + S ++E +K
Sbjct: 456 EIELDERLVKFKEEIDNDRNWTAK-VQDELISSSNVYRPPIISSIFLQHLSSIIERSK 512
>At1g55560.1 68414.m06359 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 549
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 165 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 79
N+TYG+ GV +KV+++ G P PNL
Sbjct: 31 NVTYGTASPLGVPQKVILING-QFPGPNL 58
>At1g20600.1 68414.m02573 DNA-binding protein-related low similarity
to RAV2 [Arabidopsis thaliana] GI:3868859
Length = 237
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 160 DVNIAQPSGLVESAKWKAWNGRK 228
DV++ P G V+ K+K WNG K
Sbjct: 167 DVSVYGPDGEVQQMKFKMWNGDK 189
>At4g00300.1 68417.m00037 fringe-related protein + weak similarity
to Fringe [Schistocerca gregaria](GI:6573138);Fringe
encodes an extracellular protein that regulates Notch
signalling.
Length = 785
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Frame = -1
Query: 248 ASSWEMPLRPFHAFHL-------ALSTRPLGWAMLTSPMVACLYREYSARFSSSLGLVFQ 90
A E+P R F+ +HL A +TRP+ W P V +S SS + Q
Sbjct: 371 ARMMEVPTRTFNDWHLRSDFTNLAFNTRPVTWTDCQRPRVFYFSHAFSNSSSSDTTTISQ 430
Query: 89 FL 84
+L
Sbjct: 431 YL 432
>At2g24010.1 68415.m02868 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 425
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 37 HKMSLDEQFKQVADKVRNWKTKPSDDENLALYSLYKQ-ATIGDVNIAQPSGLVESAKWKA 213
H M D+ +K + K SD N ALY Y++ + +I PS + ++ + K
Sbjct: 203 HAMISDKTYKSILKHCSFTADKTSDKCNWALYFAYREFGKVNGYSIYSPSCVHQTNQTKF 262
Query: 214 WNGR 225
+GR
Sbjct: 263 LHGR 266
>At4g38970.2 68417.m05522 fructose-bisphosphate aldolase, putative
strong similarity to plastidic fructose-bisphosphate
aldolase (EC 4.1.2.13) from Nicotiana paniculata
(NPALDP1) [GI:4827251], Oryza sativa, PIR2:T02057
[SP|Q40677]
Length = 381
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 198 RQVEGMERSQRHLPRRCQEQYIENAEKLH 284
RQ ERS H CQ Q++ +A K+H
Sbjct: 352 RQTRERERSSDHSLGPCQGQFVGSARKIH 380
>At4g03170.1 68417.m00433 hypothetical protein
Length = 250
Score = 27.5 bits (58), Expect = 3.2
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 160 DVNIAQPSGLVESAKWKAWNGRK 228
DV++ P G V+ ++K WNG K
Sbjct: 178 DVSVYGPDGKVQQMEFKMWNGDK 200
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 55 EQFKQVADKVRNWKTKPSDDENLALYSLYKQATI-GDVNIAQPSGLVE 195
E+F+ + + VR W TKP ++A + LYK I I Q G+ E
Sbjct: 729 EEFRLLFEYVREWNTKPKLC-HIAQFVLYKTFNILPPTEIVQVKGIGE 775
>At3g13400.1 68416.m01685 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.1 bits (57), Expect = 4.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 165 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 79
N+TYG+ G+ ++V+++ G P PNL
Sbjct: 32 NVTYGTAAPLGIPQQVILING-QFPGPNL 59
>At1g67300.2 68414.m07660 hexose transporter, putative similar to
hexose transporters from Solanum tuberosum [GI:8347246],
Nicotiana tabacum [GI:8347244], Arabidopsis thaliana
[GI:8347250]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 494
Score = 27.1 bits (57), Expect = 4.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 285 SGVSPHFRCIVLG-IVLGDAFATVPCLPLGALHKT-AGLGNVNITYGSLLVQGVQRKVLI 112
SGVS ++LG ++G P P+ AL+ T V TYGS + ++
Sbjct: 137 SGVSNSLAVMLLGRFLVGTGMGLGP--PVAALYVTEVSPAFVRGTYGSFIQIATCLGLMA 194
Query: 111 VTGLGLPVPNLIG 73
+G+PV N+ G
Sbjct: 195 ALFIGIPVHNITG 207
>At1g67300.1 68414.m07659 hexose transporter, putative similar to
hexose transporters from Solanum tuberosum [GI:8347246],
Nicotiana tabacum [GI:8347244], Arabidopsis thaliana
[GI:8347250]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 493
Score = 27.1 bits (57), Expect = 4.2
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -3
Query: 285 SGVSPHFRCIVLG-IVLGDAFATVPCLPLGALHKT-AGLGNVNITYGSLLVQGVQRKVLI 112
SGVS ++LG ++G P P+ AL+ T V TYGS + ++
Sbjct: 137 SGVSNSLAVMLLGRFLVGTGMGLGP--PVAALYVTEVSPAFVRGTYGSFIQIATCLGLMA 194
Query: 111 VTGLGLPVPNLIG 73
+G+PV N+ G
Sbjct: 195 ALFIGIPVHNITG 207
>At3g13390.1 68416.m01684 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 554
Score = 26.6 bits (56), Expect = 5.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 165 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 79
N+TYG++ GV ++V+++ G P PN+
Sbjct: 33 NVTYGTVSPLGVPQQVILING-QFPGPNV 60
>At1g60610.2 68414.m06823 expressed protein
Length = 340
Score = 26.6 bits (56), Expect = 5.6
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 LDEQFKQVADKVRNWKTKPSDDE---NLALYSLYKQATIGDVNIAQPSGLVESAKWKAWN 219
L ++ KQVA + +NW K +E N +L + + G+ N A G+ + + K
Sbjct: 207 LVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGF 266
Query: 220 GRKGISQDDAKNNTSKMRRNSTPNTHKLLLRIK*ISYLNYALSH 351
G I + A N + + L +K +S L H
Sbjct: 267 GDSEIDDEAASYNYLNIPGMPSTGMRCKLCNVKNVSVLLVPCRH 310
>At1g60610.1 68414.m06822 expressed protein
Length = 340
Score = 26.6 bits (56), Expect = 5.6
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Frame = +1
Query: 49 LDEQFKQVADKVRNWKTKPSDDE---NLALYSLYKQATIGDVNIAQPSGLVESAKWKAWN 219
L ++ KQVA + +NW K +E N +L + + G+ N A G+ + + K
Sbjct: 207 LVDKIKQVAVEAQNWHYKAKYNESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGF 266
Query: 220 GRKGISQDDAKNNTSKMRRNSTPNTHKLLLRIK*ISYLNYALSH 351
G I + A N + + L +K +S L H
Sbjct: 267 GDSEIDDEAASYNYLNIPGMPSTGMRCKLCNVKNVSVLLVPCRH 310
>At1g16370.1 68414.m01958 transporter-related low similarity to
organic cation transporter OCTN1 from [Homo sapiens]
GI:2605501, [Mus musculus] GI:4126605, [Rattus
norvegicus] GI:5679326; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 521
Score = 26.6 bits (56), Expect = 5.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -2
Query: 259 YCSWHRLGRCLCDRSMPSTWRSPQDRW 179
Y +WH L +CD S + P+ W
Sbjct: 72 YPTWHCLNHTICDPSASDICKLPRSAW 98
>At4g33910.1 68417.m04812 oxidoreductase, 2OG-Fe(II) oxygenase
family protein similar to prolyl 4-hydroxylase, alpha
subunit, from Gallus gallus [GI:212530], Rattus
norvegicus [GI:474940], Drosophila melanogaster
[GI:4336512]; contains PF03171 2OG-Fe(II) oxygenase
superfamily domain
Length = 288
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +1
Query: 94 KTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 213
K KP + L YS++ TI ++ + + KW A
Sbjct: 238 KVKPRKGDGLLFYSVFPNGTIDQTSLHGSCPVTKGEKWVA 277
>At4g09150.1 68417.m01515 T-complex protein 11 contains Pfam
PF05794: T-complex protein 11
Length = 1097
Score = 26.2 bits (55), Expect = 7.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 200 PSGRHGTVAKASPKTMPRTIHRK 268
P TV SPKT+PR + R+
Sbjct: 15 PVNEEDTVTTTSPKTLPRRLRRR 37
>At3g19550.1 68416.m02478 expressed protein
Length = 110
Score = 26.2 bits (55), Expect = 7.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 154 IGDVNIAQ-PSGLVESAKWKAWNGRKGISQDDAKNN 258
+G IA+ P L+ S WK + GR GIS AK+N
Sbjct: 1 MGRTGIAKAPKLLLRS--WKQFQGRAGISSKAAKSN 34
>At3g01620.1 68416.m00093 glycosyl transferase family 17 protein low
similarity to beta-1,4-mannosyl-glycoprotein
beta-1,4-N-acetylglucosaminyltransferase (EC 2.4.1.144)
from Mus musculus [SP|Q10470], Rattus norvegicus
[SP|Q02527], Homo sapiens [SP|Q09327] ; contains Pfam
profile PF04724 :Glycosyltransferase family 17
Length = 388
Score = 26.2 bits (55), Expect = 7.4
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Frame = -1
Query: 335 FK*EIYLILSNNLCVFGVEFLRIFDVLFLASSWEMPLRPF----HAFHLALSTRPL---- 180
FK ++L L +FG+ FL WE P +PF H +H S L
Sbjct: 42 FKTFLFLFTLLPLFIFGIYLHGQKITYFLRPLWESPPKPFNILPHYYHENTSMELLCNLH 101
Query: 179 GWAMLTSP 156
GW + SP
Sbjct: 102 GWKLRESP 109
>At2g23096.1 68415.m02755 oxidoreductase, 2OG-Fe(II) oxygenase
family protein contains Pfam profile: PF03171
oxidoreductase, 2OG-Fe(II) oxygenase family
Length = 274
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 76 DKVRNWKTKPSDDENLALYSLYKQATIGDVNIAQPSGLVESAKWKA 213
+K K KP + + Y+L+ TI ++ +++ KW A
Sbjct: 219 EKCVGLKVKPRQGDAIFFYNLFPNGTIDQTSLHGSCPVIKGEKWVA 264
>At1g55570.1 68414.m06360 multi-copper oxidase type I family protein
nearly identical to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Multicopper
oxidase domain PF00394
Length = 555
Score = 26.2 bits (55), Expect = 7.4
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 165 NITYGSLLVQGVQRKVLIVTGLGLPVPNL 79
N+TYG+ GV ++V+++ G P PN+
Sbjct: 34 NVTYGTASPLGVPQQVILING-QFPGPNI 61
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,954,385
Number of Sequences: 28952
Number of extensions: 196637
Number of successful extensions: 631
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 627
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 527724392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -